SMTL ID : 2vc3.1

Ricin A-Chain (Recombinant) E177D Mutant with a bound acetate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: Y.80, G.121, Y.123, I.172, R.180 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.80, A:I.172 Water bridges: A:Y.80, A:Y.80, A:Y.80 Salt bridges: A:R.180 ACT.4: 5 residues within 4Å: Chain B: Y.80, G.121, Y.123, I.172, R.180 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:Y.80, B:I.172 Water bridges: B:Y.80, B:Y.80 Salt bridges: B:R.180

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: F.119, G.120, N.122, R.125 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.120, A:N.122 Water bridges: A:H.94, A:H.94, A:A.118, A:G.121, A:R.125, A:R.125, A:R.125 Salt bridges: A:R.125 SO4.3: 1 residues within 4Å: Chain A: H.65 2 PLIP interactions: 2 interactions with chain A Water bridges: A:H.65 Salt bridges: A:H.65 SO4.5: 4 residues within 4Å: Chain B: F.119, G.120, N.122, R.125 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:G.120, B:N.122 Water bridges: B:H.94, B:H.94, B:G.121, B:R.125, B:R.125, B:R.125 Salt bridges: B:R.125 SO4.6: 1 residues within 4Å: Chain B: H.65 2 PLIP interactions: 2 interactions with chain B Water bridges: B:H.65 Salt bridges: B:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Allen, S.C.H. et al., The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae. FEBS J. (2007)

Release Date

2007-10-16

Peptides

RICIN A CHAIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

RICIN A CHAIN

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