SMTL ID : 2vfv.1

Alditol Oxidase from Streptomyces coelicolor A3(2): Complex with Sulphite

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x SFD: (S)-10-((2S,3S,4R)-5-((S)-((S)-(((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHOXY)(HYDROXY)PHOSPHORYLOXY)(HYDROXY)PHOSPHORYLOXY)-2,3,4-TRIHYDROXYPENTYL)-7,8-DIMETHYL-2,4-DIOXO-2,3,4,4A-TETRAHYDROBENZO[G]PTERIDINE-5(10H)-SULFONIC ACID(Covalent)

SFD.1: 34 residues within 4Å: Chain A: W.13, R.44, V.45, L.46, G.47, S.48, G.49, H.50, S.51, F.52, I.55, L.67, A.109, S.110, I.114, S.115, A.117, G.118, S.119, A.121, T.122, T.124, H.125, L.167, G.168, G.171, V.172, V.173, Q.292, R.326, H.347, H.376, G.378, K.379 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:W.13, A:W.13, A:H.50 Hydrogen bonds: A:V.45, A:V.45, A:G.47, A:S.48, A:G.49, A:H.50, A:S.51, A:S.110, A:S.110, A:S.115, A:S.115, A:T.122, A:H.125, A:H.125, A:V.173, A:V.173, A:R.326, A:R.326, A:G.378, A:K.379 Water bridges: A:S.115, A:H.278, A:Q.292, A:E.324 Salt bridges: A:R.326, A:H.347, A:K.379

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: P.195, L.196, A.197, P.223, G.224 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Forneris, F. et al., Structural Analysis of the Catalytic Mechanism and Stereoselectivity in Streptomyces Coelicolor Alditol Oxidase. Biochemistry (2008)

Release Date

2008-01-08

Peptides

XYLITOL OXIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

XYLITOL OXIDASE

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