SMTL ID : 2vgr.4 (3 other biounits)

Structure of the WT-Phycoerythrobilin Synthase PebS from the Cyanophage P-SSM2 in Complex with the bound Substrate Biliverdin IXa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x BLA: BILIVERDINE IX ALPHA(Non-covalent)

BLA.1: 21 residues within 4Å: Chain A: I.79, I.86, N.88, I.90, G.103, M.104, D.105, M.107, F.109, I.115, V.117, Q.121, R.142, F.143, I.154, V.156, Y.158, M.202, P.207, V.208, Y.211 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:I.79, A:I.86, A:I.86, A:I.90, A:D.105, A:F.109, A:I.115, A:V.117, A:F.143, A:I.154, A:V.156, A:V.208, A:V.208, A:Y.211 Hydrogen bonds: A:N.88, A:D.105, A:D.105, A:F.143, A:Y.158, A:Y.158 Water bridges: A:D.105 Salt bridges: A:R.142 pi-Stacking: A:F.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dammeyer, T. et al., Phycoerythrobilin Synthase (Pebs) of a Marine Virus: Crystal Structures of the Biliverdin Complex and the Substrate-Free Form. J.Biol.Chem. (2008)

Release Date

2008-08-05

Peptides

CYANOBACTERIAL PHYCOERYTHROBILIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

CYANOBACTERIAL PHYCOERYTHROBILIN

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