- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
APC.1: 9 residues within 4Å:- Chain A: N.133, S.134, G.135, K.136, T.137, P.138, Y.288, S.292
- Ligands: MN.2
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:N.133, A:S.134, A:G.135, A:K.136, A:T.137, A:T.137, A:Y.288, A:S.292
- Water bridges: A:S.232
- Salt bridges: A:K.136
- pi-Stacking: A:Y.288, A:Y.288
APC.3: 14 residues within 4Å:- Chain A: R.272, G.276, L.277, Q.278, R.279
- Chain B: N.133, S.134, G.135, K.136, T.137, P.138, Y.288, S.292
- Ligands: MN.4
23 PLIP interactions:13 interactions with chain B, 10 interactions with chain A- Hydrogen bonds: B:N.133, B:G.135, B:K.136, B:T.137, B:S.292, A:R.272, A:Q.278, A:R.279, A:R.279, A:R.279
- Water bridges: B:K.136, B:E.160, B:S.232, B:L.233, B:S.292, A:R.272, A:G.276, A:G.276, A:L.277
- Salt bridges: B:K.136, A:R.279
- pi-Stacking: B:Y.288, B:Y.288
APC.5: 14 residues within 4Å:- Chain B: R.272, G.276, L.277, Q.278, R.279
- Chain C: N.133, S.134, G.135, K.136, T.137, P.138, Y.288, S.292
- Ligands: MN.6
18 PLIP interactions:6 interactions with chain B, 12 interactions with chain C- Hydrogen bonds: B:R.272, B:G.276, B:Q.278, B:R.279, B:R.279, C:G.135, C:K.136, C:T.137, C:S.292
- Salt bridges: B:R.279, C:K.136
- Water bridges: C:K.136, C:S.190, C:S.232, C:Y.288, C:Y.288
- pi-Stacking: C:Y.288, C:Y.288
- 3 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 3 residues within 4Å:- Chain A: T.137, D.189
- Ligands: APC.1
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:T.137, H2O.242, H2O.243
MN.4: 2 residues within 4Å:- Chain B: T.137
- Ligands: APC.3
2 PLIP interactions:1 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:T.137, H2O.490
MN.6: 2 residues within 4Å:- Chain C: T.137
- Ligands: APC.5
3 PLIP interactions:1 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:T.137, H2O.724, H2O.725
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kainov, D.E. et al., Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor. J.Biol.Chem. (2008)
- Release Date
- 2007-12-04
- Peptides
- NTPASE P4: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.35 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- 3 x MN: MANGANESE (II) ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kainov, D.E. et al., Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor. J.Biol.Chem. (2008)
- Release Date
- 2007-12-04
- Peptides
- NTPASE P4: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C