SMTL ID : 2vhs.1

Cathsilicatein, a chimera

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Q.19, G.23, A.24, S.25, N.162, H.163 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.19, A:G.23, A:S.25, A:S.25, A:N.162 Water bridges: A:Y.26 Salt bridges: A:H.163 SO4.2: 2 residues within 4Å: Chain A: H.140, E.141 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.139, A:E.141 Water bridges: A:S.142 Salt bridges: A:H.140 SO4.3: 6 residues within 4Å: Chain B: Q.19, G.23, A.24, S.25, N.162, H.163 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Q.19, B:G.23, B:S.25, B:S.25, B:S.25 Water bridges: B:Y.26 Salt bridges: B:H.163 SO4.4: 2 residues within 4Å: Chain B: H.140, E.141 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.141 Water bridges: B:S.142, B:S.142 Salt bridges: B:H.140 SO4.5: 6 residues within 4Å: Chain C: Q.19, G.23, A.24, S.25, N.162, H.163 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:Q.19, C:S.25, C:S.25, C:S.25 Water bridges: C:G.23, C:Y.26, C:C.65 Salt bridges: C:H.163 SO4.6: 3 residues within 4Å: Chain B: K.124 Chain C: H.140, E.141 7 PLIP interactions: 4 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:E.141 Water bridges: C:S.142, C:S.142, B:K.124, B:K.124 Salt bridges: C:H.140, B:K.124 SO4.7: 6 residues within 4Å: Chain D: Q.19, G.23, A.24, S.25, N.162, H.163 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:Q.19, D:G.23, D:S.25, D:S.25, D:N.162 Water bridges: D:Y.26 Salt bridges: D:H.163 SO4.8: 3 residues within 4Å: Chain A: K.124 Chain D: H.140, E.141 5 PLIP interactions: 4 interactions with chain D, 1 interactions with chain A Hydrogen bonds: D:G.139, D:E.141 Water bridges: D:S.142 Salt bridges: D:H.140, A:K.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fairhead, M. et al., Crystal Structure and Silica Condensing Activities of Silicatein Alpha-Cathepsin L Chimeras. Chem. Commun. (2008)

Release Date

2008-03-11

Peptides

CATHSILICATEIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

CATHSILICATEIN