SMTL ID : 2vi7.2 (1 other biounit)

Structure of a Putative Acetyltransferase (PA1377)from Pseudomonas aeruginosa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: V.34, L.35, Q.36, G.90, M.91 Chain B: R.80 Ligands: GOL.10 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:L.35, A:Q.36, A:Q.36, A:M.91, B:R.80, B:R.80 GOL.2: 4 residues within 4Å: Chain A: E.109, D.112, I.113, W.117 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.112, A:W.117 GOL.3: 5 residues within 4Å: Chain A: R.80 Chain B: Q.36, R.48 Ligands: AZI.7, GOL.8 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.36, B:R.45, B:R.48, A:R.80 GOL.8: 7 residues within 4Å: Chain A: R.80 Chain B: V.34, L.35, Q.36, G.90, M.91 Ligands: GOL.3 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:L.35, B:Q.36, B:Q.36, B:M.91, A:R.80, A:R.80 GOL.9: 4 residues within 4Å: Chain B: E.109, D.112, I.113, W.117 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.112, B:W.117 GOL.10: 5 residues within 4Å: Chain A: Q.36, R.48 Chain B: R.80 Ligands: GOL.1, AZI.14 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.36, A:R.45, A:R.48, B:R.80

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 8 residues within 4Å: Chain A: G.99, K.100, G.101, V.102, G.103, S.104, L.137 Ligands: AZI.6 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.99, A:G.101, A:V.102, A:G.103, A:S.104, A:S.104 Water bridges: A:K.100, A:K.100, A:L.137 Salt bridges: A:K.140 SO4.5: 4 residues within 4Å: Chain A: R.139, E.144, T.145, M.165 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.145 Water bridges: A:E.144 Salt bridges: A:R.139 SO4.11: 8 residues within 4Å: Chain B: G.99, K.100, G.101, V.102, G.103, S.104, L.137 Ligands: AZI.13 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.99, B:G.101, B:V.102, B:G.103, B:S.104, B:S.104 Water bridges: B:K.100, B:K.100, B:L.137 Salt bridges: B:K.140 SO4.12: 4 residues within 4Å: Chain B: R.139, E.144, T.145, M.165 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.145 Water bridges: B:E.144 Salt bridges: B:R.139

4 x AZI: AZIDE ION(Non-covalent)

AZI.6: 3 residues within 4Å: Chain A: Q.98, A.134 Ligands: SO4.4 No protein-ligand interaction detected (PLIP) AZI.7: 4 residues within 4Å: Chain A: R.80, I.81 Chain B: L.35 Ligands: GOL.3 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.80, A:I.81 Water bridges: A:R.82, B:M.37, B:M.37 AZI.13: 3 residues within 4Å: Chain B: Q.98, A.134 Ligands: SO4.11 No protein-ligand interaction detected (PLIP) AZI.14: 4 residues within 4Å: Chain A: L.35 Chain B: R.80, I.81 Ligands: GOL.10 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.80, B:R.80, B:I.81 Water bridges: B:R.82, A:M.37, A:M.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davies, A.M. et al., Structure of a Putative Acetyltransferase (Pa1377) from Pseudomonas Aeruginosa. Acta Crystallogr.,Sect.F (2008)

Release Date

2008-05-20

Peptides

ACETYLTRANSFERASE PA1377: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

ACETYLTRANSFERASE PA1377

Related Entries With Identical Sequence