- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GLY: GLYCINE(Non-covalent)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
PLP.2: 16 residues within 4Å:- Chain A: S.93, G.94, A.95, H.122, A.171, A.172, D.197, A.199, H.200, T.223, H.225, K.226
- Chain B: Y.51, G.256, G.257
- Ligands: GLY.1
16 PLIP interactions:11 interactions with chain A, 4 interactions with chain B, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:A.199
- Hydrogen bonds: A:G.94, A:A.95, A:N.98, A:H.200, B:G.256, B:G.257
- Water bridges: A:S.93, A:S.93, A:T.221, B:Y.51, B:Q.255, G.1
- Salt bridges: A:H.225, A:K.226
- pi-Stacking: A:H.122
PLP.7: 16 residues within 4Å:- Chain A: Y.51, G.256, G.257
- Chain B: S.93, G.94, A.95, H.122, A.171, A.172, D.197, A.199, H.200, T.223, H.225, K.226
- Ligands: GLY.6
16 PLIP interactions:11 interactions with chain B, 1 Ligand-Ligand interactions, 4 interactions with chain A- Hydrophobic interactions: B:A.199
- Hydrogen bonds: B:G.94, B:A.95, B:N.98, B:H.200, A:G.256, A:G.257
- Water bridges: B:S.93, B:S.93, B:T.221, G.6, A:Y.51, A:Q.255
- Salt bridges: B:H.225, B:K.226
- pi-Stacking: B:H.122
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.3: 5 residues within 4Å:- Chain A: Y.152, D.153, R.156, E.185, I.186
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.152, A:I.186
- Water bridges: A:K.182
MPD.4: 10 residues within 4Å:- Chain A: M.99, F.103, F.131, Q.135, Y.136, I.254
- Chain B: F.103, F.131, I.254
- Ligands: MPD.9
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:F.103, B:I.254, A:F.131
- Water bridges: A:Y.136
MPD.8: 5 residues within 4Å:- Chain B: Y.152, D.153, R.156, E.185, I.186
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:Y.152, B:I.186
- Water bridges: B:K.182
MPD.9: 10 residues within 4Å:- Chain A: F.103, F.131, I.254
- Chain B: M.99, F.103, F.131, Q.135, Y.136, I.254
- Ligands: MPD.4
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:F.103, A:I.254, B:F.131
- Water bridges: B:Y.136
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rajaram, V. et al., Crystal Structure of S172Absshmt and its Complexes. To be Published
- Release Date
- 2007-12-18
- Peptides
- SERINE HYDROXYMETHYLTRANSFERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GLY: GLYCINE(Non-covalent)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rajaram, V. et al., Crystal Structure of S172Absshmt and its Complexes. To be Published
- Release Date
- 2007-12-18
- Peptides
- SERINE HYDROXYMETHYLTRANSFERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A