SMTL ID : 2vii.1

PspF1-275-Mg-AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 14 residues within 4Å: Chain A: N.7, L.8, L.9, R.38, G.39, T.40, G.41, K.42, E.43, L.44, M.189, I.226, R.227 Ligands: MG.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:L.9, A:L.9, A:G.39, A:T.40, A:G.41, A:K.42, A:E.43 Water bridges: A:L.44 Salt bridges: A:K.42, A:R.227

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: E.43 Ligands: AMP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joly, N. et al., Trapping of a Transcription Complex Using a New Nucleotide Analogue: AMP Aluminium Fluoride. J.Mol.Biol. (2008)

Release Date

2008-01-22

Peptides

PSP OPERON TRANSCRIPTIONAL ACTIVATOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PSP OPERON TRANSCRIPTIONAL ACTIVATOR