SMTL ID : 2vip.1

Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 9 residues within 4Å: Chain A: V.30, C.31, H.46, Y.150, Q.195, G.196, D.197, S.198 Ligands: L1R.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Q.195 Hydrogen bonds: A:G.196, A:S.198, A:S.198 Salt bridges: A:H.46

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: H.95, T.178, K.180, M.181 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.96 Water bridges: A:T.179 Salt bridges: A:H.95, A:K.180

1 x L1R: 4-(2-AMINOETHOXY)-3,5-DICHLORO-N-[3-(1-METHYLETHOXY)PHENYL]BENZAMIDE

L1R.3: 16 residues within 4Å: Chain A: C.31, H.46, C.47, H.94, D.192, S.193, C.194, Q.195, S.198, V.216, S.217, W.218, G.219, G.221, C.222 Ligands: ACT.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Q.195 Hydrogen bonds: A:D.192 Water bridges: A:H.46, A:Q.195 pi-Cation interactions: A:H.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frederickson, M. et al., Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator. J.Med.Chem. (2008)

Release Date

2008-01-22

Peptides

UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B

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