SMTL ID : 2vla.1

Crystal structure of restriction endonuclease BpuJI recognition domain in complex with cognate DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x PG6: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE(Non-covalent)

PG6.1: 11 residues within 4Å: Chain A: Q.134, I.135, Q.172, G.173, I.175, K.176, W.247, G.248, N.249, K.250 Ligands: NA.2 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: G.173 Ligands: PG6.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sukackaite, R. et al., The Recognition Domain of the Bpuji Restriction Endonuclease in Complex with Cognate DNA at 1.3-A Resolution. J.Mol.Biol. (2008)

Release Date

2008-05-06

Peptides

RESTRICTION ENDONUCLEASE R.BPUJI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RESTRICTION ENDONUCLEASE R.BPUJI