- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.89 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PLI: (2E)-2-{[(Z)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4(1H)-YLIDENE}METHYL]IMINO}PROPANOIC ACID
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
PGE.2: 7 residues within 4Å:- Chain A: V.16, S.17, M.18, Y.44
- Chain D: P.7, Q.311, E.313
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain D- Water bridges: A:M.18, D:Q.311
PGE.8: 7 residues within 4Å:- Chain B: P.7, Q.311, E.313
- Chain C: V.16, S.17, M.18, Y.44
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain C- Water bridges: B:Q.311, C:M.18
- 4 x K: POTASSIUM ION(Non-covalent)
K.3: 3 residues within 4Å:- Chain A: G.52, N.262
- Chain B: E.69
5 PLIP interactions:2 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: A:G.52, A:N.262, B:E.69, H2O.4, H2O.32
K.4: 3 residues within 4Å:- Chain A: E.69
- Chain B: G.52, N.262
5 PLIP interactions:1 interactions with chain A, 2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: A:E.69, B:G.52, B:N.262, H2O.12, H2O.31
K.9: 3 residues within 4Å:- Chain C: G.52, N.262
- Chain D: E.69
5 PLIP interactions:1 interactions with chain D, 2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: D:E.69, C:G.52, C:N.262, H2O.41, H2O.69
K.10: 3 residues within 4Å:- Chain C: E.69
- Chain D: G.52, N.262
5 PLIP interactions:2 interactions with chain D, 1 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: D:G.52, D:N.262, C:E.69, H2O.49, H2O.68
- 2 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)
P33.6: 10 residues within 4Å:- Chain B: Y.3, Y.324, Y.414, A.415, D.418
- Chain C: M.1, Y.3, Y.324, Y.414, D.418
7 PLIP interactions:5 interactions with chain C, 2 interactions with chain B- Hydrogen bonds: C:M.1, C:M.1, B:D.418
- Water bridges: C:A.5, C:A.5, C:D.422, B:D.422
P33.12: 10 residues within 4Å:- Chain A: M.1, Y.3, Y.324, Y.414, D.418
- Chain D: Y.3, Y.324, Y.414, A.415, D.418
7 PLIP interactions:2 interactions with chain D, 5 interactions with chain A- Hydrogen bonds: D:D.418, A:M.1, A:M.1
- Water bridges: D:D.422, A:A.5, A:A.5, A:D.422
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Milic, D. et al., Insights Into the Catalytic Mechanism of Tyrosine Phenol-Lyase from X-Ray Structures of Quinonoid Intermediates. J.Biol.Chem. (2008)
- Release Date
- 2008-08-19
- Peptides
- TYROSINE PHENOL-LYASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.89 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PLI: (2E)-2-{[(Z)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4(1H)-YLIDENE}METHYL]IMINO}PROPANOIC ACID
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 4 x K: POTASSIUM ION(Non-covalent)
- 2 x P33: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Milic, D. et al., Insights Into the Catalytic Mechanism of Tyrosine Phenol-Lyase from X-Ray Structures of Quinonoid Intermediates. J.Biol.Chem. (2008)
- Release Date
- 2008-08-19
- Peptides
- TYROSINE PHENOL-LYASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B