- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GLY: GLYCINE(Non-covalent)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
PLP.2: 17 residues within 4Å:- Chain A: S.93, G.94, A.95, N.98, H.122, A.171, S.172, D.197, A.199, H.200, T.223, H.225, K.226
- Chain B: Y.51, G.256, G.257
- Ligands: GLY.1
13 PLIP interactions:11 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:A.199
- Hydrogen bonds: A:G.94, A:A.95, A:N.98, A:H.200, B:G.256, B:G.257
- Water bridges: A:S.93, A:S.93, A:T.221
- Salt bridges: A:H.225, A:K.226
- pi-Stacking: A:H.122
PLP.8: 17 residues within 4Å:- Chain A: Y.51, G.256, G.257
- Chain B: S.93, G.94, A.95, N.98, H.122, A.171, S.172, D.197, A.199, H.200, T.223, H.225, K.226
- Ligands: GLY.7
13 PLIP interactions:11 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:A.199
- Hydrogen bonds: B:G.94, B:A.95, B:N.98, B:H.200, A:G.256, A:G.257
- Water bridges: B:S.93, B:S.93, B:T.221
- Salt bridges: B:H.225, B:K.226
- pi-Stacking: B:H.122
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.3: 5 residues within 4Å:- Chain A: Y.152, D.153, R.156, E.185, I.186
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.152, A:I.186
- Water bridges: A:K.182
MPD.4: 9 residues within 4Å:- Chain A: M.99, F.103, F.131, Q.135, Y.136, I.254
- Chain B: F.103, I.254
- Ligands: MPD.10
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:F.103, A:F.131, B:F.103, B:I.254
MPD.5: 4 residues within 4Å:- Chain A: I.177, G.208, H.210, P.211
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.177, A:P.211
- Hydrogen bonds: A:G.208
MPD.9: 5 residues within 4Å:- Chain B: Y.152, D.153, R.156, E.185, I.186
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:Y.152, B:I.186
- Water bridges: B:K.182
MPD.10: 9 residues within 4Å:- Chain A: F.103, I.254
- Chain B: M.99, F.103, F.131, Q.135, Y.136, I.254
- Ligands: MPD.4
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:F.103, A:I.254, B:F.103, B:F.131
MPD.11: 4 residues within 4Å:- Chain B: I.177, G.208, H.210, P.211
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:I.177, B:P.211
- Hydrogen bonds: B:G.208
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pai, V.R. et al., Structural and Functional Studies of Bacillus Stearothermophilus Serine Hydroxymethyltransferase: The Role of Asn(341), Tyr(60) and Phe(351) in Tetrahydrofolate Binding. Biochem.J. (2009)
- Release Date
- 2008-12-16
- Peptides
- SERINE HYDROXYMETHYLTRANSFERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GLY: GLYCINE(Non-covalent)
- 2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- 6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pai, V.R. et al., Structural and Functional Studies of Bacillus Stearothermophilus Serine Hydroxymethyltransferase: The Role of Asn(341), Tyr(60) and Phe(351) in Tetrahydrofolate Binding. Biochem.J. (2009)
- Release Date
- 2008-12-16
- Peptides
- SERINE HYDROXYMETHYLTRANSFERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A