SMTL ID : 2vpe.1 (1 other biounit)

Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- ARG- THR- MLY- GLN- THR- ALA: HISTONE H3 TAIL(Non-covalent)

ALA-ARG-THR-MLY-GLN-THR-ALA.1: 17 residues within 4Å: Chain A: Y.6, V.15, N.16, D.17, Q.19, A.21, I.22, L.23, E.25, W.31, Y.44, G.45, L.47, T.48, E.50, A.53, V.54 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:A.21, A:I.22, A:L.23, A:W.31, A:W.31, A:Y.44, A:Y.44, A:L.47, A:T.48 Hydrogen bonds: A:A.21, A:L.23, A:E.25, A:Y.44, A:Y.44, A:L.47, A:T.48 Water bridges: A:Y.6, A:D.20, A:E.25, A:G.45 Salt bridges: A:D.17 pi-Cation interactions: A:W.31

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: Q.19, H.33 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Q.19, A:H.33, A:C.36

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.8, C.11, H.33, C.36 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.8, A:C.11, A:H.33, A:C.36 ZN.4: 4 residues within 4Å: Chain A: C.24, C.28, C.57, C.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.24, A:C.28, A:C.57, A:C.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fiedler, M. et al., Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex. Mol.Cell (2008)

Release Date

2008-06-17

Peptides

PYGOPUS HOMOLOG 1: A
B-CELL CLL/LYMPHOMA 9 PROTEIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PYGOPUS HOMOLOG 1

B-CELL CLL/LYMPHOMA 9 PROTEIN

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