- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.42 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
CA.2: 5 residues within 4Å:- Chain A: D.41, A.86, D.353, H.354
- Ligands: MN.1
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.41, A:D.41, A:D.353, A:H.354
CA.7: 5 residues within 4Å:- Chain B: D.41, A.86, D.353, H.354
- Ligands: MN.6
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:D.41, B:D.41, B:D.353, B:H.354
CA.12: 5 residues within 4Å:- Chain C: D.41, A.86, D.353, H.354
- Ligands: MN.11
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:D.41, C:D.41, C:D.353, C:H.354
CA.17: 5 residues within 4Å:- Chain D: D.41, A.86, D.353, H.354
- Ligands: MN.16
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:D.41, D:D.41, D:D.353, D:H.354
- 8 x ACT: ACETATE ION(Non-functional Binders)
ACT.3: 4 residues within 4Å:- Chain A: R.473, Y.474, D.488, R.490
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:R.473
- Hydrogen bonds: A:R.490
- Water bridges: A:Y.474
- Salt bridges: A:H.491
ACT.5: 8 residues within 4Å:- Chain A: Y.134, T.135, T.136, G.155, D.156, L.157, E.168, P.169
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:Y.134
- Hydrogen bonds: A:T.135, A:T.136, A:G.155
ACT.8: 4 residues within 4Å:- Chain B: R.473, Y.474, D.488, R.490
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:R.473
- Hydrogen bonds: B:R.490
- Salt bridges: B:H.491
ACT.10: 8 residues within 4Å:- Chain B: Y.134, T.135, T.136, G.155, D.156, L.157, E.168, P.169
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:Y.134
- Hydrogen bonds: B:T.135, B:T.136, B:G.155
ACT.13: 4 residues within 4Å:- Chain C: R.473, Y.474, D.488, R.490
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:R.473
- Hydrogen bonds: C:R.490
- Water bridges: C:Y.474
- Salt bridges: C:H.491
ACT.15: 8 residues within 4Å:- Chain C: Y.134, T.135, T.136, G.155, D.156, L.157, E.168, P.169
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:Y.134
- Hydrogen bonds: C:T.135, C:T.136, C:G.155
ACT.18: 4 residues within 4Å:- Chain D: R.473, Y.474, D.488, R.490
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:R.473
- Hydrogen bonds: D:R.490
- Salt bridges: D:H.491
ACT.20: 8 residues within 4Å:- Chain D: Y.134, T.135, T.136, G.155, D.156, L.157, E.168, P.169
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:Y.134
- Hydrogen bonds: D:T.135, D:T.136, D:G.155
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.4: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.9: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.14: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)NA.19: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jonas, S. et al., A New Member of the Alkaline Phosphatase Superfamily with a Formylglycine Nucleophile: Structural and Kinetic Characterisation of a Phosphonate Monoester Hydrolase/Phosphodiesterase from Rhizobium Leguminosarum. J.Mol.Biol. (2008)
- Release Date
- 2008-09-30
- Peptides
- PUTATIVE SULFATASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.42 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x CA: CALCIUM ION(Non-covalent)
- 8 x ACT: ACETATE ION(Non-functional Binders)
- 4 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jonas, S. et al., A New Member of the Alkaline Phosphatase Superfamily with a Formylglycine Nucleophile: Structural and Kinetic Characterisation of a Phosphonate Monoester Hydrolase/Phosphodiesterase from Rhizobium Leguminosarum. J.Mol.Biol. (2008)
- Release Date
- 2008-09-30
- Peptides
- PUTATIVE SULFATASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A