SMTL ID : 2vra.2 (3 other biounits)

Drosophila Robo IG1-2 (monoclinic form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x SGN- IDS- SGN- IDS: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose

SGN-IDS-SGN-IDS.1: 7 residues within 4Å: Chain A: K.23, N.24, M.73, Q.74, G.75, K.76, R.108 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:K.23, A:K.23 Hydrogen bonds: A:N.24, A:Q.74

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: V.106, I.136 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.108 SO4.3: 4 residues within 4Å: Chain A: K.145, R.163, V.164, D.181 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.163 Salt bridges: A:K.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fukuhara, N. et al., Structural and Functional Analysis of Slit and Heparin Binding to Immunoglobulin-Like Domains 1 and 2 of Drosophila Robo. J.Biol.Chem. (2008)

Release Date

2008-04-08

Peptides

ROUNDABOUT 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ROUNDABOUT 1

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