SMTL ID : 2vrr.1

Structure of SUMO modified Ubc9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

hetero-1-1-mer

Ligands

4 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 2 residues within 4Å: Chain A: A.15, K.18 No protein-ligand interaction detected (PLIP) FMT.2: 7 residues within 4Å: Chain A: L.57, F.58, K.59, E.78, P.79, L.81, F.155 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.59 Water bridges: A:E.78 FMT.4: 4 residues within 4Å: Chain B: R.45, R.52, E.75 Ligands: FMT.5 No protein-ligand interaction detected (PLIP) FMT.5: 1 residues within 4Å: Ligands: FMT.4 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: P.72, E.98, E.99 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Knipscheer, P. et al., Ubc9 sumoylation regulates SUMO target discrimination. Mol. Cell (2008)

Release Date

2008-08-19

Peptides

SUMO-CONJUGATING ENZYME UBC9: A
SMALL UBIQUITIN-RELATED MODIFIER 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

SUMO-CONJUGATING ENZYME UBC9

SMALL UBIQUITIN-RELATED MODIFIER 1

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