SMTL ID : 2vsl.1

Crystal Structure of XIAP BIR3 with a Bivalent Smac Mimetic

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x MAA- LYS- PRO- PHE: PEPTIDE (MAA-LYS-PRO-PHE)(Non-covalent)

MAA-LYS-PRO-PHE.1: 15 residues within 4Å: Chain A: F.1, L.43, K.48, V.49, K.50, G.57, L.58, T.59, D.60, W.61, K.62, E.65, Q.70, W.74, Y.75 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.43, A:K.48, A:K.50, A:W.61, A:Q.70, A:W.74 Hydrogen bonds: A:G.57, A:G.57, A:T.59, A:T.59, A:Q.70, A:Y.75 Water bridges: A:Q.70 pi-Cation interactions: A:K.48

1 x 15P: POLYETHYLENE GLYCOL (N=34)(Non-functional Binders)

15P.2: 3 residues within 4Å: Chain A: K.73, W.74, H.94 No protein-ligand interaction detected (PLIP)

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.51, C.54, H.71, C.78 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.51, A:C.54, A:H.71, A:C.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nikolovska-Coleska, Z. et al., Interaction of a Cyclic, Bivalent Smac Mimetic with the X-Linked Inhibitor of Apoptosis Protein. Biochemistry (2008)

Release Date

2008-09-02

Peptides

BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4