SMTL ID : 2vuu.7 (23 other biounits)

Crystal structure of NADP-bound NmrA-AreA zinc finger complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 22 residues within 4Å: Chain A: N.12, T.14, G.15, R.16, Q.17, H.37, N.80, T.81, T.82, Q.84, A.85, E.88, M.113, M.127, W.128, K.131, A.150, G.151, I.152, Y.153, N.156, Y.276 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:A.150, A:Y.153 Hydrogen bonds: A:N.12, A:T.14, A:T.14, A:T.14, A:R.16, A:R.16, A:Q.17, A:Q.17, A:H.37, A:N.80, A:T.81, A:Q.84, A:K.131, A:Y.153, A:N.156, A:N.156 Water bridges: A:A.18 Salt bridges: A:R.16, A:H.37 pi-Stacking: A:H.37, A:H.37

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain B: C.4, C.7, C.25, C.28 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.4, B:C.7, B:C.25, B:C.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kotaka, M. et al., Structural Analysis of the Recognition of the Negative Regulator Nmra and DNA by the Zinc Finger from the Gata-Type Transcription Factor Area. J.Mol.Biol. (2008)

Release Date

2008-07-29

Peptides

NITROGEN METABOLITE REPRESSION REGULATOR NMRA: A
NITROGEN REGULATORY PROTEIN AREA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
O

NITROGEN METABOLITE REPRESSION REGULATOR NMRA

NITROGEN REGULATORY PROTEIN AREA

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