SMTL ID : 2vuw.1

Structure of human haspin kinase domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: K.49, I.224, D.225 Ligands: 5ID.2 Ligand excluded by PLIP

1 x 5ID: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL(Non-covalent)

5ID.2: 19 residues within 4Å: Chain A: I.28, G.29, E.30, F.33, V.36, A.47, K.49, I.95, F.143, E.144, F.145, G.146, G.147, D.149, Q.152, G.191, L.194, I.224 Ligands: IOD.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.47, A:L.194 Hydrogen bonds: A:E.144, A:G.146, A:D.149, A:Q.152 Water bridges: A:D.149

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 2 residues within 4Å: Chain A: H.15, H.101 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.15, A:H.101, H2O.1, H2O.1, H2O.8

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 6 residues within 4Å: Chain A: Y.205, L.207, K.210, S.212, L.329, C.330 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.212

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.5: 1 residues within 4Å: Chain A: P.109 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eswaran, J. et al., Structure and Functional Characterization of the Atypical Human Kinase Haspin. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2008-09-16

Peptides

SERINE/THREONINE-PROTEIN KINASE HASPIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SERINE/THREONINE-PROTEIN KINASE HASPIN