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SMTL ID : 2vvl.4
(3 other biounits)
The structure of MAO-N-D3, a variant of monoamine oxidase from Aspergillus niger.
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.45 Å
Oligo State
hetero-1-1-mer
Ligands
2 x
FAD
:
FLAVIN-ADENINE DINUCLEOTIDE
(Non-covalent)
FAD.1:
33 residues within 4Å:
Chain A:
I.45
,
G.46
,
G.48
,
Y.49
,
C.50
,
E.69
,
A.70
,
R.71
,
G.75
,
G.76
,
R.77
,
S.78
,
G.91
,
G.92
,
T.93
,
W.94
,
P.278
,
V.279
,
T.307
,
I.308
,
P.309
,
V.312
,
I.316
,
W.420
,
F.425
,
A.429
,
W.430
,
N.456
,
S.457
,
S.465
,
F.466
,
I.467
,
A.470
29
PLIP interactions
:
29 interactions with chain A
Hydrophobic interactions:
A:W.420
,
A:A.429
Hydrogen bonds:
A:G.48
,
A:C.50
,
A:A.70
,
A:R.71
,
A:R.71
,
A:R.77
,
A:G.92
,
A:T.93
,
A:W.94
,
A:W.94
,
A:V.279
,
A:V.279
,
A:T.307
,
A:N.456
,
A:S.457
,
A:S.457
,
A:S.465
,
A:I.467
Water bridges:
A:G.51
,
A:G.76
,
A:Q.99
,
A:R.294
,
A:D.468
Salt bridges:
A:R.77
,
A:R.77
pi-Stacking:
A:F.425
,
A:W.430
FAD.3:
35 residues within 4Å:
Chain B:
I.45
,
G.46
,
G.48
,
Y.49
,
C.50
,
E.69
,
A.70
,
R.71
,
G.75
,
G.76
,
R.77
,
S.78
,
G.91
,
G.92
,
T.93
,
W.94
,
L.245
,
C.277
,
P.278
,
V.279
,
T.307
,
I.308
,
P.309
,
V.312
,
I.316
,
W.420
,
F.425
,
A.429
,
W.430
,
N.456
,
S.457
,
S.465
,
F.466
,
I.467
,
A.470
21
PLIP interactions
:
21 interactions with chain B
Hydrophobic interactions:
B:W.420
,
B:A.429
Hydrogen bonds:
B:C.50
,
B:A.70
,
B:R.71
,
B:R.77
,
B:G.92
,
B:T.93
,
B:W.94
,
B:W.94
,
B:V.279
,
B:V.279
,
B:S.457
,
B:S.457
,
B:S.465
,
B:I.467
Water bridges:
B:R.77
Salt bridges:
B:R.77
,
B:R.77
pi-Stacking:
B:F.425
,
B:W.430
3 x
EDO
:
1,2-ETHANEDIOL
(Non-functional Binders)
EDO.2:
0 residues within 4Å:
(No contacts)
No protein-ligand interaction detected (PLIP)
EDO.4:
4 residues within 4Å:
Chain A:
N.120
,
R.123
,
R.351
,
T.371
4
PLIP interactions
:
4 interactions with chain A
Hydrogen bonds:
A:N.120
,
A:R.123
,
A:R.123
,
A:R.351
EDO.5:
7 residues within 4Å:
Chain A:
H.112
,
N.113
,
A.114
,
L.115
Chain B:
F.170
,
D.173
,
Y.176
3
PLIP interactions
:
2 interactions with chain A
,
1 interactions with chain B
Hydrogen bonds:
A:L.115
,
A:L.115
,
B:D.173
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Atkin, K.E. et al., The Structure of Monoamine Oxidase from Aspergillus Niger Provides a Molecular Context for Improvements in Activity Obtained by Directed Evolution. J.Mol.Biol. (2008)
Release Date
2008-11-04
Peptides
MONOAMINE OXIDASE N:
A
MONOAMINE OXIDASE N:
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
F
B
G
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Secondary Structure
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MONOAMINE OXIDASE N
MONOAMINE OXIDASE N
Related Entries With Identical Sequence
2vvl.1
|
2vvl.2
|
2vvl.3
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
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High
Extreme