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SMTL ID : 2vvq.3
(2 other biounits)
Crystal structure of Mycobacterium tuberculosis ribose-5-phosphate isomerase B in complex with the inhibitor 5-deoxy-5-phospho-D- ribonate
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.00 Å
Oligo State
homo-dimer
Ligands
2 x
R10
:
5-O-phosphono-D-ribonic acid
R10.1:
17 residues within 4Å:
Chain A:
D.11
,
H.12
,
A.13
,
Y.46
,
G.69
,
G.70
,
S.71
,
G.72
,
N.73
,
G.74
,
E.75
,
R.113
Chain B:
H.102
,
N.103
,
R.137
,
H.138
,
R.141
22
PLIP interactions
:
12 interactions with chain A
,
10 interactions with chain B
Hydrogen bonds:
A:D.11
,
A:G.70
,
A:S.71
,
A:G.72
,
A:N.73
,
A:G.74
,
A:E.75
,
B:N.103
Water bridges:
A:S.71
,
A:S.71
,
A:R.113
,
B:H.102
,
B:R.137
,
B:R.137
,
B:R.141
,
B:R.141
,
B:R.141
Salt bridges:
A:H.12
,
A:R.113
,
B:H.102
,
B:R.137
,
B:R.141
R10.2:
17 residues within 4Å:
Chain A:
H.102
,
N.103
,
R.137
,
H.138
,
R.141
Chain B:
D.11
,
H.12
,
A.13
,
Y.46
,
G.69
,
G.70
,
S.71
,
G.72
,
N.73
,
G.74
,
E.75
,
R.113
22
PLIP interactions
:
12 interactions with chain B
,
10 interactions with chain A
Hydrogen bonds:
B:D.11
,
B:G.70
,
B:S.71
,
B:G.72
,
B:N.73
,
B:G.74
,
B:E.75
,
A:H.102
,
A:N.103
Water bridges:
B:S.71
,
B:S.71
,
B:R.113
,
A:R.137
,
A:R.137
,
A:R.141
,
A:R.141
,
A:R.141
Salt bridges:
B:H.12
,
B:R.113
,
A:H.102
,
A:R.137
,
A:R.141
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Roos, A.K. et al., D-Ribose-5-Phosphate Isomerase B from Escherichia Coli is Also a Functional D-Allose-6-Phosphate Isomerase, While the Mycobacterium Tuberculosis Enzyme is not. J.Mol.Biol. (2008)
Release Date
2008-07-01
Peptides
RIBOSE-5-PHOSPHATE ISOMERASE B:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
E
B
E
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RIBOSE-5-PHOSPHATE ISOMERASE B
Toggle Identical (AB)
Related Entries With Identical Sequence
2vvo.1
|
2vvo.2
|
2vvo.3
|
2vvp.1
|
2vvp.2
|
2vvp.3
|
2vvq.1
|
2vvq.2
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