SMTL ID : 2vzd.2 (1 other biounit)

Crystal structure of the C-terminal calponin homology domain of alpha parvin in complex with paxillin LD1 motif

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 7 residues within 4Å: Chain A: L.69, H.70, F.72, F.73, L.74, Q.81 Ligands: EDO.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.74 Water bridges: A:T.75

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: S.87, P.105, E.106 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.106 EDO.4: 3 residues within 4Å: Chain A: Q.48, D.51, Y.54 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.48 EDO.5: 4 residues within 4Å: Chain A: T.47, A.50, D.51, K.82 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.82, A:K.82 Water bridges: A:D.51 EDO.6: 5 residues within 4Å: Chain A: H.70, S.71, F.72, F.73 Ligands: PG4.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.70 EDO.7: 2 residues within 4Å: Chain A: D.107, D.112 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.107 Water bridges: A:D.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lorenz, S. et al., Structural Analysis of the Interactions between Paxillin Ld Motifs and Alpha-Parvin. Structure (2008)

Release Date

2008-10-28

Peptides

ALPHA-PARVIN: A
PAXILLIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

ALPHA-PARVIN

PAXILLIN

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