SMTL ID : 2w1w.2 (1 other biounit)

Native structure of a family 35 carbohydrate binding module from Clostridium thermocellum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: Q.8, T.27, C.30, D.124 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:T.27, A:C.30, A:D.124, A:D.124 CA.2: 5 residues within 4Å: Chain A: N.33, Y.34, N.36, R.68 Ligands: GOL.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:Y.34, H2O.4, H2O.5, H2O.8

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: E.20, N.23, N.33, R.68, W.91, N.122 Ligands: CA.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:N.23, A:N.33, A:N.36, A:R.68, A:R.68, A:N.122 Water bridges: A:N.23, A:N.33, A:N.33, A:N.36

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 5 residues within 4Å: Chain A: R.59, W.94, N.95, E.96, Y.125 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.94, A:E.96, A:Y.125 Water bridges: A:R.59, A:R.59 Salt bridges: A:R.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montanier, C. et al., Evidence that Family 35 Carbohydrate Binding Modules Display Conserved Specificity But Divergent Function. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-01-20

Peptides

LIPOLYTIC ENZYME, G-D-S-L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

LIPOLYTIC ENZYME, G-D-S-L

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