SMTL ID : 2w20.1 (1 other biounit)

STRUCTURE OF THE CATALYTIC DOMAIN OF THE NATIVE NANA SIALIDASE FROM STREPTOCOCCUS PNEUMONIAE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

monomer

Ligands

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 8 residues within 4Å: Chain A: E.130, Y.145, R.146, E.147, G.148, E.149, K.150, R.209 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.146, A:G.148, A:E.149 Water bridges: A:R.209, A:R.209

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: G.196, N.197, F.200, K.204, T.205, S.206 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: V.308, Q.311 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: D.65, N.66, E.442, K.463 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.66, A:K.463 GOL.5: 4 residues within 4Å: Chain A: S.51, W.53, S.89, I.90 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.51, A:S.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, G. et al., Structure of the Catalytic Domain of Streptococcus Pneumoniae Sialidase Nana. Acta Crystallogr.,Sect.F (2008)

Release Date

2008-12-23

Peptides

SIALIDASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SIALIDASE A

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