SMTL ID : 2w2n.1

WT PCSK9-deltaC bound to EGF-A H306Y mutant of LDLR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: A.176, A.178, V.181, T.183, C.206, D.208 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:A.178, A:V.181, A:T.183 CA.2: 5 residues within 4Å: Chain B: T.29, E.31, D.45, L.46, G.49 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:T.29, B:D.45, B:L.46, B:G.49, H2O.5 CA.3: 1 residues within 4Å: Chain B: D.68 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bottomley, M.J. et al., Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants. J.Biol.Chem. (2009)

Release Date

2008-11-18

Peptides

PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9: A
LOW-DENSITY LIPOPROTEIN RECEPTOR: B
PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

C
P

PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9

LOW-DENSITY LIPOPROTEIN RECEPTOR

PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9

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