SMTL ID : 2w3p.1

BoxC crystal structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

4 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 6 residues within 4Å: Chain A: F.110, C.111, G.177, T.178, Q.524, F.528 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.524 BME.2: 8 residues within 4Å: Chain A: W.23, I.36, I.38, N.53, Y.55, V.59, C.91, L.147 No protein-ligand interaction detected (PLIP) BME.5: 6 residues within 4Å: Chain B: F.110, C.111, G.177, T.178, Q.524, F.528 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.524 BME.6: 8 residues within 4Å: Chain B: W.23, I.36, I.38, N.53, Y.55, V.59, C.91, L.147 No protein-ligand interaction detected (PLIP)

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: V.461, E.462, R.465 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.465 Water bridges: A:V.461 GOL.4: 6 residues within 4Å: Chain A: D.123, R.126, H.127, P.428, M.429, H.432 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.123, A:R.126, A:M.429, A:H.432 Water bridges: A:R.126, A:H.432 GOL.7: 6 residues within 4Å: Chain B: D.123, R.126, H.127, P.428, M.429, H.432 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:D.123, B:D.123, B:R.126, B:R.126, B:M.429, B:H.432 GOL.8: 7 residues within 4Å: Chain B: K.51, S.54, S.92, A.94, N.95, I.96, F.97 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.92, B:S.92, B:I.96 Water bridges: B:S.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bains, J. et al., Structural and Biophysical Characterization of Boxc from Burkholderia Xenovorans Lb400: A Novel Ring-Cleaving Enzyme in the Crotonase Superfamily. J.Biol.Chem. (2009)

Release Date

2009-04-14

Peptides

BENZOYL-COA-DIHYDRODIOL LYASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BENZOYL-COA-DIHYDRODIOL LYASE