SMTL ID : 2w48.1

Crystal structure of the Full-length Sorbitol Operon Regulator SorC from Klebsiella pneumoniae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-tetramer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: S.116, W.117, G.211, G.213, D.243, I.244, C.245 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.116, A:W.117, A:W.117, A:G.211, A:D.243, A:C.245 GOL.5: 7 residues within 4Å: Chain D: W.117, G.118, R.119, A.120, V.121, G.211, I.212 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:W.117, D:R.119, D:R.119, D:A.120, D:V.121, D:I.212

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 8 residues within 4Å: Chain A: W.117, G.144, G.145, P.146, A.178, L.179, F.226, Y.227 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.117, A:P.146, A:A.178, A:F.226, A:F.226, A:Y.227 Hydrogen bonds: A:W.117, A:G.145

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: E.126 Ligand excluded by PLIP

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.4: 6 residues within 4Å: Chain B: S.204, L.205, D.206, Q.274, A.275, R.276 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:R.276 Hydrogen bonds: B:D.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Sanctis, D. et al., Crystal Structure of the Full-Length Sorbitol Operon Regulator Sorc from Klebsiella Pneumoniae: Structural Evidence for a Novel Transcriptional Regulation Mechanism. J.Mol.Biol. (2009)

Release Date

2009-05-05

Peptides

SORBITOL OPERON REGULATOR: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

SORBITOL OPERON REGULATOR