SMTL ID : 2w4j.1

X-ray structure of a DAP-Kinase 2-277

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 19 residues within 4Å: Chain A: L.19, G.20, S.21, G.22, A.25, V.27, A.40, K.42, I.77, L.93, E.94, V.96, E.100, E.143, N.144, M.146, I.160, D.161 Ligands: MG.3 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:E.94, A:V.96, A:E.100, A:D.161, A:D.161 Water bridges: A:K.42, A:E.143, A:D.161, A:D.161, A:G.163 Salt bridges: A:K.42, A:K.42

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: D.14, T.15, G.16, K.29, C.30, R.31, Q.38 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:K.29, A:R.31, A:Q.38 Hydrogen bonds: A:D.14, A:Q.38 Water bridges: A:E.17

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: N.144, D.161 Ligands: ADP.1 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.161, H2O.8, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Diego, I. et al., X-Ray Structure of a Dap-Kinase Calmodulin Complex. To be Published

Release Date

2009-12-22

Peptides

DEATH-ASSOCIATED PROTEIN KINASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DEATH-ASSOCIATED PROTEIN KINASE 1