SMTL ID : 2w7v.1 (1 other biounit)

periplasmic domain of EpsL from Vibrio parahaemolyticus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: L.21, G.22, V.24, L.27 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.26, A:L.27, A:L.27 EDO.3: 4 residues within 4Å: Chain B: L.21, G.22, V.24, L.27 3 PLIP interactions: 3 interactions with chain B Water bridges: B:D.26, B:L.27, B:L.27

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 2 residues within 4Å: Chain A: K.33, R.42 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.42, A:R.42 Salt bridges: A:K.33, A:R.42 PO4.4: 2 residues within 4Å: Chain B: K.33, R.42 4 PLIP interactions: 4 interactions with chain B Water bridges: B:R.42, B:R.42 Salt bridges: B:K.33, B:R.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., The Dimer Formed by the Periplasmic Domain of Epsl from the Type 2 Secretion System of Vibrio Parahaemolyticus. J.Struct.Biol. (2009)

Release Date

2010-03-31

Peptides

GENERAL SECRETION PATHWAY PROTEIN L: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GENERAL SECRETION PATHWAY PROTEIN L

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