SMTL ID : 2w8h.1

Crystal structure of spin labeled Wza24-345.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

homo-octamer

Ligands

8 x MTN: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate(Non-covalent)

MTN.1: 5 residues within 4Å: Chain A: L.47, P.49, Q.317, L.318, C.319 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.47, A:P.49, A:Q.317 Hydrogen bonds: A:L.47 MTN.2: 5 residues within 4Å: Chain B: L.47, P.49, Q.317, L.318, C.319 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:P.49, B:Q.317, B:Q.317 Hydrogen bonds: B:L.47 MTN.3: 5 residues within 4Å: Chain C: L.47, P.49, Q.317, L.318, C.319 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:P.49, C:Q.317 Hydrogen bonds: C:L.47 MTN.4: 4 residues within 4Å: Chain D: L.47, P.49, Q.317, C.319 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:P.49, D:Q.317 Hydrogen bonds: D:L.47 MTN.6: 4 residues within 4Å: Chain E: L.47, P.49, L.318, C.319 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:L.47, E:P.49 Hydrogen bonds: E:L.47 MTN.7: 5 residues within 4Å: Chain F: L.47, P.49, R.286, Q.317, C.319 5 PLIP interactions: 5 interactions with chain F Hydrophobic interactions: F:L.47, F:P.49, F:Q.317, F:Q.317 Hydrogen bonds: F:L.47 MTN.8: 5 residues within 4Å: Chain G: L.47, P.49, Q.317, L.318, C.319 5 PLIP interactions: 5 interactions with chain G Hydrophobic interactions: G:L.47, G:P.49, G:Q.317, G:Q.317 Hydrogen bonds: G:L.47 MTN.9: 5 residues within 4Å: Chain H: L.47, P.49, Q.317, L.318, C.319 4 PLIP interactions: 4 interactions with chain H Hydrophobic interactions: H:P.49, H:Q.317, H:Q.317 Hydrogen bonds: H:L.47

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain D: D.237, K.254 Chain E: R.257 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hagelueken, G. et al., Peldor Distance Fingerprinting of the Octameric Outer-Membrane Protein Wza from Escherichia Coli. Angew.Chem.Int.Ed.Engl. (2009)

Release Date

2009-02-10

Peptides

PUTATIVE OUTER MEMBRANE LIPOPROTEIN WZA: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

PUTATIVE OUTER MEMBRANE LIPOPROTEIN WZA