SMTL ID : 2w8j.1

SPT with PLP-ser

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x PLS: [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE(Non-covalent)

PLS.1: 18 residues within 4Å: Chain A: T.132, G.133, Y.134, N.137, H.158, S.160, E.201, D.230, A.232, H.233, T.261, S.263, K.264, R.377 Chain B: S.101, F.292, T.293, A.294 19 PLIP interactions: 17 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:A.232 Hydrogen bonds: A:G.133, A:Y.134, A:N.137, A:H.233, A:S.263, A:S.263, A:K.264, B:A.294 Water bridges: A:S.205, A:S.205, A:T.261, A:T.261, A:R.377, B:S.101 Salt bridges: A:H.158, A:K.264, A:R.377 pi-Stacking: A:H.158 PLS.2: 18 residues within 4Å: Chain A: S.101, F.292, T.293, A.294 Chain B: T.132, G.133, Y.134, N.137, H.158, S.160, E.201, D.230, A.232, H.233, T.261, S.263, K.264, R.377 19 PLIP interactions: 16 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:A.232 Hydrogen bonds: B:G.133, B:Y.134, B:N.137, B:H.233, B:T.261, B:S.263, B:S.263, B:K.264, A:T.293, A:A.294 Water bridges: B:S.205, B:S.205, B:R.377, A:S.101 Salt bridges: B:H.158, B:K.264, B:R.377 pi-Stacking: B:H.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Raman, M.C.C. et al., The External-Aldimine Form of Serine Palmitoyltranserase; Structural, Kinetic and Spectroscopic Analysis of the Wild-Type Enzyme and Hsan1 Mutant Mimics. J.Biol.Chem. (2009)

Release Date

2009-01-27

Peptides

SERINE PALMITOYLTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SERINE PALMITOYLTRANSFERASE

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