SMTL ID : 2w8t.1

SPT with PLP, N100C

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 16 residues within 4Å: Chain A: T.132, G.133, Y.134, N.137, H.158, S.160, E.201, D.230, A.232, H.233, T.261, S.263, K.264, G.270 Chain B: T.293, A.294 15 PLIP interactions: 14 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:H.158, A:K.264 Hydrogen bonds: A:G.133, A:Y.134, A:S.160, A:D.230, A:T.261, A:T.261, A:S.263, B:A.294 Water bridges: A:N.137, A:N.137, A:S.205 Salt bridges: A:K.264 pi-Stacking: A:H.158 PLP.2: 16 residues within 4Å: Chain A: T.293, A.294 Chain B: T.132, G.133, Y.134, N.137, H.158, S.160, E.201, D.230, A.232, H.233, T.261, S.263, K.264, G.270 17 PLIP interactions: 15 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:H.158, B:K.264 Hydrogen bonds: B:G.133, B:Y.134, B:N.137, B:S.160, B:T.261, B:T.261, B:S.263, A:T.293, A:A.294 Water bridges: B:E.201, B:S.205, B:D.230, B:H.233 Salt bridges: B:K.264 pi-Stacking: B:H.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Raman, M.C.C. et al., The External-Aldimine Form of Serine Palmitoyltranserase; Structural, Kinetic and Spectroscopic Analysis of the Wild-Type Enzyme and Hsan1 Mutant Mimics. J.Biol.Chem. (2009)

Release Date

2009-01-27

Peptides

SERINE PALMITOYLTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SERINE PALMITOYLTRANSFERASE