- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 4 residues within 4Å:- Chain A: D.444, N.471, G.473
- Ligands: TPP.1
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.444, A:G.473, H2O.14
MG.6: 5 residues within 4Å:- Chain B: D.444, G.445, N.471, G.473
- Ligands: TPP.5
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.444, B:G.473, H2O.25
- 4 x PY0: (1S,2S)-1-amino-1,2-dihydroxypropan-1-olate
PY0.3: 7 residues within 4Å:- Chain A: T.388, Q.477
- Chain B: G.27, D.28, H.114, H.115
- Ligands: TPP.1
6 PLIP interactions:3 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: A:T.388
- Hydrogen bonds: A:Q.477, A:Q.477, B:D.28, B:D.28
- Salt bridges: B:H.114
PY0.4: 8 residues within 4Å:- Chain A: H.92, C.221, H.225, G.286, A.287, H.310, S.311, D.312
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:H.310, A:S.311
- Water bridges: A:S.311
- Salt bridges: A:H.92, A:H.225, A:H.310
PY0.7: 9 residues within 4Å:- Chain A: G.27, D.28, H.115
- Chain B: F.292, T.388, I.476, Q.477, I.480
- Ligands: TPP.5
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:T.388
- Hydrogen bonds: B:Q.477, B:Q.477, A:D.28, A:H.114
PY0.8: 8 residues within 4Å:- Chain B: H.92, C.221, H.225, G.286, A.287, H.310, S.311, D.312
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:H.310, B:H.310, B:S.311
- Water bridges: B:H.92, B:S.311
- Salt bridges: B:H.92, B:H.225, B:H.310
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Konig, S. et al., Allosteric Activation of Pyruvate Decarboxylases. A Never-Ending Story. J.Mol.Catal., B Enzym. (2014)
- Release Date
- 2009-02-03
- Peptides
- PYRUVATE DECARBOXYLASE ISOZYME 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 4 x PY0: (1S,2S)-1-amino-1,2-dihydroxypropan-1-olate
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Konig, S. et al., Allosteric Activation of Pyruvate Decarboxylases. A Never-Ending Story. J.Mol.Catal., B Enzym. (2014)
- Release Date
- 2009-02-03
- Peptides
- PYRUVATE DECARBOXYLASE ISOZYME 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D