SMTL ID : 2w9s.1 (5 other biounits)

STAPHYLOCOCCUS AUREUS S1:DHFR IN COMPLEX WITH TRIMETHOPRIM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: R.13, Y.127 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.13, A:Y.127

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.2: 28 residues within 4Å: Chain A: V.7, A.8, I.15, G.16, Y.17, N.19, Q.20, L.21, W.23, A.44, R.45, K.46, T.47, L.63, T.64, N.65, Q.66, N.78, L.80, F.93, G.94, G.95, Q.96, T.97, L.98, Y.99, T.122 Ligands: TOP.3 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:L.21, A:T.47 Hydrogen bonds: A:A.8, A:I.15, A:Y.17, A:N.19, A:N.19, A:R.45, A:R.45, A:K.46, A:T.47, A:T.47, A:T.64, A:N.65, A:N.65, A:Q.66, A:G.95, A:Q.96, A:T.97, A:T.97, A:L.98, A:Y.99, A:T.122 Water bridges: A:L.80, A:T.122 Salt bridges: A:R.45

1 x TOP: TRIMETHOPRIM(Non-covalent)

TOP.3: 13 residues within 4Å: Chain A: I.6, V.7, A.8, L.21, D.28, L.29, I.32, S.50, I.51, F.93, Y.99, T.112 Ligands: NDP.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.21, A:F.93 Hydrogen bonds: A:I.6, A:V.7, A:A.8, A:S.50, A:T.112 Water bridges: A:L.21, A:T.112 Salt bridges: A:D.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heaslet, H. et al., Structural Comparison of Chromosomal and Exogenous Dihydrofolate Reductase from Staphylococcus Aureus in Complex with the Potent Inhibitor Trimethoprim. Proteins (2009)

Release Date

2009-03-24

Peptides

DIHYDROFOLATE REDUCTASE TYPE 1 FROM TN4003: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DIHYDROFOLATE REDUCTASE TYPE 1 FROM TN4003

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