SMTL ID : 2wa2.2 (1 other biounit)

Structure of the methyltransferase domain from Modoc Virus, a Flavivirus with No Known Vector (NKV)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 19 residues within 4Å: Chain A: S.65, G.67, G.90, C.91, G.92, G.94, S.95, W.96, T.113, L.114, H.119, E.120, V.139, D.140, V.141, T.142, D.155, I.156 Ligands: SO4.3 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:S.65, A:C.91, A:G.94, A:S.95, A:W.96, A:T.113, A:L.114, A:H.119, A:E.120, A:D.140, A:V.141, A:D.155 Water bridges: A:D.88, A:G.90, A:C.91, A:R.93, A:G.157

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.46, R.50, R.93 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.66, A:R.93, A:R.93 Salt bridges: A:R.46, A:R.50, A:R.93 SO4.3: 5 residues within 4Å: Chain A: I.156, G.157, E.158, R.169 Ligands: SAM.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.157, A:E.158, A:E.158 Salt bridges: A:R.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jansson, A.M. et al., Structure of the Methyltransferase Domain from the Modoc Virus, a Flavivirus with No Known Vector. Acta Crystallogr.,Sect.D (2009)

Release Date

2009-08-04

Peptides

NON-STRUCTURAL PROTEIN 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

NON-STRUCTURAL PROTEIN 5

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