SMTL ID : 2wan.1

PULLULANASE FROM BACILLUS ACIDOPULLULYTICUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: R.684, D.688, V.691, V.732, T.733, N.737, M.738 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:V.732, A:M.738, A:M.738 Water bridges: A:R.684, A:D.688, A:N.737 GOL.2: 7 residues within 4Å: Chain A: R.303, N.304, Y.574, R.575, T.576, E.595, H.596 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.303, A:N.304, A:N.304, A:T.576, A:E.595 Water bridges: A:R.303, A:H.596 GOL.3: 8 residues within 4Å: Chain A: K.758, E.761, L.762, Y.816, G.894, D.895, I.914, S.915 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:K.758, A:I.914 Water bridges: A:K.758, A:K.758, A:E.761, A:D.895, A:D.895, A:T.916 GOL.4: 4 residues within 4Å: Chain A: K.876, T.877, S.878, A.913 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.878 Water bridges: A:S.878, A:S.878 GOL.5: 3 residues within 4Å: Chain A: G.796, D.797, S.798 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.797, A:S.798, A:S.798 Water bridges: A:R.441, A:D.797, A:V.799 GOL.6: 5 residues within 4Å: Chain A: G.418, G.421, D.422, Q.539, Q.543 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.539, A:Q.543 Water bridges: A:D.422, A:Q.539 GOL.7: 3 residues within 4Å: Chain A: S.901, H.904 Ligands: GOL.8 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.901, A:S.901 Water bridges: A:G.903, A:K.920 GOL.8: 6 residues within 4Å: Chain A: T.889, E.899, K.900, S.901, K.920 Ligands: GOL.7 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.901, A:K.920, A:K.920

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.9: 3 residues within 4Å: Chain A: N.825, P.828, R.831 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.831 Salt bridges: A:R.831 SO4.10: 2 residues within 4Å: Chain A: N.372, W.376 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.376 Water bridges: A:N.372 SO4.11: 6 residues within 4Å: Chain A: Q.837, Q.840, N.841, A.860, N.861, H.862 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.837, A:Q.840, A:N.841, A:N.861, A:H.862, A:H.862 SO4.12: 4 residues within 4Å: Chain A: V.707, P.848, T.849, N.850 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.850, A:T.851 Water bridges: A:V.707, A:T.849

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.13: 5 residues within 4Å: Chain A: K.711, N.712, I.715, Q.719, F.844 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.719 Water bridges: A:N.712 ACT.14: 8 residues within 4Å: Chain A: T.594, E.595, L.627, G.628, K.629, D.630, T.631, Q.664 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.595 Hydrogen bonds: A:D.630, A:T.631 Water bridges: A:Q.600 ACT.15: 2 residues within 4Å: Chain A: L.379, R.405 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.344, A:Y.344 Salt bridges: A:R.405 ACT.16: 3 residues within 4Å: Chain A: K.672, T.722, S.723 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.672 Salt bridges: A:K.672

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Turkenburg, J.P. et al., Structure of a Pullulanase from Bacillus Acidopullulyticus. Proteins (2009)

Release Date

2009-05-05

Peptides

PULLULANASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PULLULANASE