- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- monomer
- Ligands
- 19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x M2F: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-mannopyranoside(Non-covalent)
M2F.2: 14 residues within 4Å:- Chain A: N.153, W.173, D.174, W.175, W.370, C.399, N.436, E.437, W.445, W.508, Y.512, Q.530, W.620, W.631
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:W.445, A:W.445, A:Y.512
- Hydrogen bonds: A:W.173, A:W.173, A:W.370, A:Y.512, A:Y.512
- Water bridges: A:N.153
- pi-Stacking: A:W.508
- Halogen bonds: A:N.436
- 6 x BR: BROMIDE ION(Non-covalent)
BR.15: 3 residues within 4Å:- Chain A: I.82, P.115, K.117
Ligand excluded by PLIPBR.16: 4 residues within 4Å:- Chain A: Q.660, Q.661, N.662, D.663
Ligand excluded by PLIPBR.17: 2 residues within 4Å:- Chain A: P.472, Y.484
Ligand excluded by PLIPBR.18: 3 residues within 4Å:- Chain A: Q.83, T.113, P.115
Ligand excluded by PLIPBR.22: 2 residues within 4Å:- Chain A: P.724, R.752
Ligand excluded by PLIPBR.24: 3 residues within 4Å:- Chain A: N.275, W.277, N.365
Ligand excluded by PLIP- 3 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Offen, W.A. et al., Structure of the Michaelis Complex of Beta-Mannosidase, Man2A, Provides Insight Into the Conformational Itinerary of Mannoside Hydrolysis. Cell(Cambridge,Mass.) (2009)
- Release Date
- 2009-03-17
- Peptides
- BETA-MANNOSIDASE: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- monomer
- Ligands
- 19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x M2F: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-mannopyranoside(Non-covalent)
- 6 x BR: BROMIDE ION(Non-covalent)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Offen, W.A. et al., Structure of the Michaelis Complex of Beta-Mannosidase, Man2A, Provides Insight Into the Conformational Itinerary of Mannoside Hydrolysis. Cell(Cambridge,Mass.) (2009)
- Release Date
- 2009-03-17
- Peptides
- BETA-MANNOSIDASE: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B