SMTL ID : 2wc9.1

Crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage SPP1 with bound Mn

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 2 residues within 4Å: Chain A: D.56, H.190 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.56, A:H.190 MN.2: 3 residues within 4Å: Chain A: D.56, D.111, Y.197 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.56, A:D.56, A:D.111

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: R.107, R.201 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.107, A:R.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smits, C. et al., Structural Basis for the Nuclease Activity of a Bacteriophage Large Terminase. Embo Rep. (2009)

Release Date

2009-03-24

Peptides

TERMINASE LARGE SUBUNIT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TERMINASE LARGE SUBUNIT

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