SMTL ID : 2wcx.1

Crystal Structure of Hepatitis C Virus NS5B Polymerase in Complex with Thienopyrrole-Based Finger-Loop Inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.221, T.222, D.319 Ligands: MN.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.221, A:T.222, A:D.319, H2O.20, H2O.20 MN.2: 4 residues within 4Å: Chain A: D.221, D.319, D.320 Ligands: MN.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.221, A:D.319, A:D.320, H2O.20

1 x VGC: 6-CYCLOHEXYL-4-METHYL-5-PHENYL-4H-THIENO[3,2-B]PYRROLE-2-CARBOXYLIC ACID(Non-covalent)

VGC.3: 14 residues within 4Å: Chain A: V.38, L.393, A.394, A.396, A.397, T.400, I.425, H.429, L.493, G.494, V.495, P.496, W.501, R.504 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.38, A:L.393, A:L.393, A:A.396, A:A.397, A:I.425, A:L.493, A:V.495 Water bridges: A:G.494, A:R.504 Salt bridges: A:R.504

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin Hernando, J.I. et al., Optimization of Thienopyrrole-Based Finger-Loop Inhibitors of the Hepatitis C Virus Ns5B Polymerase. Chemmedchem (2009)

Release Date

2009-08-18

Peptides

RNA-DIRECTED RNA POLYMERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-DIRECTED RNA POLYMERASE

Related Entries With Identical Sequence