SMTL ID : 2we5.2 (1 other biounit)

Carbamate kinase from Enterococcus faecalis bound to MgADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: G.10, G.11, K.209, T.229, G.230, V.231, V.234, C.235, Y.238, H.262, F.263, A.264, S.267, M.268, K.271 Ligands: MG.2 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.11, A:T.229, A:T.229, A:G.230, A:C.235, A:C.235, A:Y.238, A:Y.238, A:A.264 Water bridges: A:N.12, A:K.209, A:K.209, A:D.210, A:Y.238, A:K.271 Salt bridges: A:K.209, A:K.271, A:K.271 pi-Stacking: A:Y.238, A:Y.238 ADP.3: 16 residues within 4Å: Chain B: G.10, G.11, K.209, T.229, G.230, V.231, V.234, C.235, Y.238, H.262, F.263, A.264, S.267, M.268, K.271 Ligands: MG.4 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:G.11, B:T.229, B:T.229, B:G.230, B:C.235, B:C.235, B:Y.238, B:A.264 Water bridges: B:N.12, B:K.209, B:K.209, B:Y.238, B:K.271, B:K.271 Salt bridges: B:K.209, B:K.271, B:K.271 pi-Stacking: B:Y.238, B:Y.238

2 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 1 residues within 4Å: Ligands: ADP.1 No protein-ligand interaction detected (PLIP) MG.4: 1 residues within 4Å: Ligands: ADP.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramon-Maiques, S. et al., Substrate Binding and Catalysis in Carbamate Kinase Ascertained by Crystallographic and Site- Directed Mutagenesis Studies. Movements and Significance of a Unique Globular Subdomain of This Key Enzyme for Fermentative ATP Production in Bacteria. J.Mol.Biol. (2010)

Release Date

2010-03-16

Peptides

CARBAMATE KINASE 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

CARBAMATE KINASE 1

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