SMTL ID : 2wfb.1

High resolution structure of the apo form of the orange protein (ORP) from Desulfovibrio gigas

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 9 residues within 4Å: Chain A: F.24, G.25, G.56, V.76, G.77, A.80, K.120 Ligands: PO4.2, PO4.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:F.24, A:G.25, A:G.77 Water bridges: A:R.26 Salt bridges: A:K.120 PO4.2: 7 residues within 4Å: Chain A: R.26, H.53, G.54, A.55, G.56 Ligands: PO4.1, PO4.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:A.55, A:G.56 Water bridges: A:G.54, A:G.54, A:G.54, A:I.57, A:K.120 Salt bridges: A:R.26 PO4.3: 7 residues within 4Å: Chain A: G.77, P.78, K.79, A.80, K.120 Ligands: PO4.1, PO4.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.77, A:K.79, A:A.80 Water bridges: A:G.54, A:G.56 Salt bridges: A:K.120

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 3 residues within 4Å: Chain A: R.23, R.26, Q.49 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.26 Hydrogen bonds: A:Q.49 Salt bridges: A:R.23, A:R.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Najmudin, S. et al., High Resolution Crystal Structure of the Apo Form of the Orange Protein (Apo-Orp) from Desulfovibrio Gigas. To be Published

Release Date

2010-05-26

Peptides

PUTATIVE UNCHARACTERIZED PROTEIN ORP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PUTATIVE UNCHARACTERIZED PROTEIN ORP