SMTL ID : 2wgd.1

Crystal structure of KasA of Mycobacterium tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) GOL.2: 5 residues within 4Å: Chain A: A.18, V.19, E.30, L.262, R.363 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.19, A:V.19, A:E.30, A:R.363 GOL.3: 10 residues within 4Å: Chain A: E.199, G.200, P.201, I.202, E.203, P.206, F.239, H.345, S.346, I.347 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.200, A:E.203 GOL.6: 4 residues within 4Å: Chain A: V.285, R.289, T.292, V.328 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.289, A:V.328 GOL.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) GOL.8: 5 residues within 4Å: Chain B: A.18, V.19, E.30, L.262, R.363 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:V.19, B:V.19, B:R.363 GOL.9: 10 residues within 4Å: Chain B: E.199, G.200, P.201, I.202, E.203, P.206, F.239, H.345, S.346, I.347 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.200, B:E.203 GOL.12: 4 residues within 4Å: Chain B: V.285, R.289, T.292, V.328 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.289, B:V.328

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.4: 4 residues within 4Å: Chain A: M.213, A.279, T.315, I.317 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.317 IPA.10: 4 residues within 4Å: Chain B: M.213, A.279, T.315, I.317 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:I.317 Hydrogen bonds: B:T.315

2 x NA: SODIUM ION(Non-functional Binders)

NA.5: 6 residues within 4Å: Chain A: N.309, A.310, H.311, E.354, N.399, N.400 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.354, A:E.354, A:N.400 NA.11: 6 residues within 4Å: Chain B: N.309, A.310, H.311, E.354, N.399, N.400 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.309, B:N.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luckner, S.R. et al., Crystal Structures of Mycobacterium Tuberculosis Kasa Show Mode of Action within Cell Wall Biosynthesis and its Inhibition by Thiolactomycin. Structure (2009)

Release Date

2009-07-21

Peptides

3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1

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