SMTL ID : 2wgg.2 (3 other biounits)

Crystal Structure of Mycobacterium tuberculosis C171Q KasA variant with bound TLM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x TLM: THIOLACTOMYCIN(Non-covalent)

TLM.1: 13 residues within 4Å: Chain A: Q.171, F.237, V.278, A.279, P.280, H.311, T.313, G.318, H.345, F.402, G.403, F.404, G.406 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.237, A:P.280, A:T.313, A:F.402, A:F.404, A:F.404 TLM.5: 13 residues within 4Å: Chain B: Q.171, F.237, V.278, A.279, P.280, H.311, T.313, G.318, H.345, F.402, G.403, F.404, G.406 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.237, B:P.280, B:P.280, B:T.313, B:F.402, B:F.404, B:F.404 pi-Stacking: B:F.404

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: N.309, A.310, H.311, E.354, N.399, N.400 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.309, A:E.354, A:N.400 Water bridges: A:K.340 NA.6: 6 residues within 4Å: Chain B: N.309, A.310, H.311, E.354, N.399, N.400 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.309, B:N.400 Water bridges: B:K.340

2 x 2PE: NONAETHYLENE GLYCOL(Non-covalent)

2PE.3: 13 residues within 4Å: Chain A: Y.82, L.116, G.117, A.119, E.120, G.200, P.201, L.205, A.209, F.210 Chain B: I.122, I.145, M.146 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.117, A:A.119 Water bridges: A:G.115 2PE.7: 9 residues within 4Å: Chain A: I.145 Chain B: L.116, A.119, E.120, E.199, G.200, P.201, L.205, A.209 No protein-ligand interaction detected (PLIP)

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 11 residues within 4Å: Chain A: E.199, G.200, P.201, I.202, P.206, F.239, G.240, E.241, H.345, S.346, I.347 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luckner, S.R. et al., Crystal Structures of Mycobacterium Tuberculosis Kasa Show Mode of Action within Cell Wall Biosynthesis and its Inhibition by Thiolactomycin. Structure (2009)

Release Date

2009-07-21

Peptides

3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1

Related Entries With Identical Sequence