SMTL ID : 2wgi.1

Crystal structure of the acyl-enzyme OXA-10 W154A-benzylpenicillin at pH 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

homo-dimer

Ligands

2 x PNM: OPEN FORM - PENICILLIN G(Covalent)

PNM.1: 9 residues within 4Å: Chain A: A.48, S.49, W.84, S.97, V.99, L.137, T.188, F.190, R.232 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.190, A:F.190 Hydrogen bonds: A:S.49, A:S.97, A:T.188, A:F.190, A:F.190 Salt bridges: A:K.187, A:R.232 PNM.2: 13 residues within 4Å: Chain B: A.48, S.49, M.81, W.84, S.97, V.99, L.137, T.188, G.189, F.190, S.191, L.229, R.232 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.137, B:F.190 Hydrogen bonds: B:S.49, B:S.97, B:T.188, B:F.190, B:F.190 Salt bridges: B:R.232

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain B: K.27, A.34 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baurin, S. et al., Critical Role of Tryptophan 154 for the Activity and Stability of Class D Beta-Lactamases. Biochemistry (2009)

Release Date

2009-11-10

Peptides

BETA-LACTAMASE OXA-10: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BETA-LACTAMASE OXA-10

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