SMTL ID : 2wgy.1

Crystal structure of the G243A mutant of CYP130 from M. tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 26 residues within 4Å: Chain A: L.77, M.95, V.96, H.103, R.107, M.246, A.249, G.250, T.253, V.254, M.257, L.290, P.295, V.296, L.299, R.301, Y.324, T.352, F.353, S.354, A.357, H.358, C.360, L.361, G.362, A.366 21 PLIP interactions: 20 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:V.96, A:A.249, A:T.253, A:M.257, A:L.290, A:V.296, A:L.299, A:Y.324, A:T.352, A:L.361, A:A.366 Hydrogen bonds: A:Y.324, A:S.354, A:S.354 Salt bridges: A:H.103, A:R.107, A:R.301, A:H.358 pi-Stacking: A:F.353 Metal complexes: A:C.360, H2O.9

5 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 9 residues within 4Å: Chain A: F.15, Q.16, L.17, A.18, W.23, M.29, Y.30, L.323, S.397 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.15, A:L.323 Hydrogen bonds: A:A.18, A:S.397 IPA.3: 5 residues within 4Å: Chain A: T.19, A.20, E.21, G.395, G.396 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:T.19, A:A.20 Hydrogen bonds: A:A.20, A:G.396 IPA.4: 4 residues within 4Å: Chain A: R.133, T.147, E.148, P.152 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.152 Hydrogen bonds: A:R.133, A:T.147 IPA.5: 7 residues within 4Å: Chain A: F.150, L.258, S.261, M.262, L.265, C.370, A.373 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.150, A:L.258, A:L.265, A:A.373 IPA.6: 2 residues within 4Å: Chain A: R.66, H.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.66, A:H.68

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.7: 3 residues within 4Å: Chain A: P.165, R.209, R.210 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.209, A:R.210 SO4.8: 5 residues within 4Å: Chain A: R.267, R.268, A.339, E.340, L.341 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:L.341 Water bridges: A:R.267, A:R.267, A:R.267, A:A.339 Salt bridges: A:R.267, A:R.268 SO4.9: 2 residues within 4Å: Chain A: H.359, R.367 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.367, A:R.367 Salt bridges: A:H.359, A:R.367 SO4.10: 4 residues within 4Å: Chain A: R.211, G.228, D.230, G.231 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.228, A:G.231 Water bridges: A:R.211 Salt bridges: A:R.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Podust, L.M. et al., Interaction of Mycobacterium tuberculosis CYP130 with heterocyclic arylamines. J. Biol. Chem. (2009)

Release Date

2009-05-12

Peptides

CYTOCHROME P450 130: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME P450 130