SMTL ID : 2wie.1

High-resolution structure of the rotor ring from a proton dependent ATP synthase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

homo-15-mer

Ligands

120 x CVM: CYMAL-4(Non-covalent)(Non-functional Binders)

CVM.1: 9 residues within 4Å: Chain A: S.3, N.4, L.5, A.8, A.9 Chain B: L.5 Chain O: S.3 Ligands: CVM.9, CVM.113 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain O Hydrogen bonds: A:L.5, O:S.3 Water bridges: A:S.3, O:S.3 CVM.2: 6 residues within 4Å: Chain A: A.59, F.60, A.63, Y.67 Chain O: E.62 Ligands: CVM.3 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:A.63 CVM.3: 5 residues within 4Å: Chain A: A.63, I.66, Y.67 Ligands: CVM.2, CVM.120 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.63, A:I.66, A:Y.67 CVM.4: 3 residues within 4Å: Chain A: A.59, E.62, I.66 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.62, A:I.66 CVM.5: 3 residues within 4Å: Chain B: Y.67 Ligands: CVM.6, CVM.11 No protein-ligand interaction detected (PLIP) CVM.6: 3 residues within 4Å: Chain A: I.66, V.70 Ligands: CVM.5 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.66, A:V.70 CVM.7: 3 residues within 4Å: Chain A: L.73, V.74, A.78 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.73, A:V.74, A:A.78 CVM.8: 1 residues within 4Å: Chain A: L.69 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.69 CVM.9: 5 residues within 4Å: Chain B: L.5, A.9 Chain C: L.5 Ligands: CVM.1, CVM.17 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:A.9 CVM.10: 4 residues within 4Å: Chain A: E.62 Chain B: A.59, F.60, A.63 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:A.63 CVM.11: 4 residues within 4Å: Chain B: I.66, Y.67 Ligands: CVM.5, CVM.14 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:I.66, B:Y.67 CVM.12: 3 residues within 4Å: Chain B: L.73, V.74 Ligands: CVM.15 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.73, B:V.74 CVM.13: 4 residues within 4Å: Chain B: I.66 Chain C: Y.67 Ligands: CVM.15, CVM.16 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain B Hydrophobic interactions: C:Y.67, B:I.66 CVM.14: 4 residues within 4Å: Chain B: A.59, E.62, I.66 Ligands: CVM.11 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:A.59, B:E.62, B:E.62, B:I.66 CVM.15: 7 residues within 4Å: Chain B: I.66, L.69, V.70, L.73 Ligands: CVM.12, CVM.13, CVM.19 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:I.66, B:L.69, B:V.70, B:L.73 CVM.16: 4 residues within 4Å: Chain C: I.66, Y.67 Ligands: CVM.13, CVM.19 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:I.66, C:Y.67 CVM.17: 9 residues within 4Å: Chain B: S.3 Chain C: N.4, L.5, A.8, A.9, I.12 Chain D: L.5 Ligands: CVM.9, CVM.25 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:S.3, C:L.5 Hydrophobic interactions: C:I.12 CVM.18: 3 residues within 4Å: Chain B: E.62 Chain C: A.63, Y.67 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:A.63 CVM.19: 2 residues within 4Å: Ligands: CVM.15, CVM.16 No protein-ligand interaction detected (PLIP) CVM.20: 3 residues within 4Å: Chain C: A.59, E.62, I.66 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:E.62, C:I.66 CVM.21: 3 residues within 4Å: Chain C: I.66 Ligands: CVM.22, CVM.27 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:I.66 CVM.22: 4 residues within 4Å: Chain C: I.66, L.69, L.73 Ligands: CVM.21 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:I.66, C:L.69, C:L.73 CVM.23: 2 residues within 4Å: Chain C: L.73, A.78 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:L.73, C:A.78 CVM.24: 1 residues within 4Å: Chain C: L.69 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:L.69 CVM.25: 8 residues within 4Å: Chain D: N.4, L.5, A.8, A.9, I.12 Chain E: L.5 Ligands: CVM.17, CVM.33 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain C Hydrophobic interactions: D:I.12 Hydrogen bonds: D:L.5 Water bridges: C:S.3, C:S.3 CVM.26: 5 residues within 4Å: Chain C: E.62 Chain D: A.59, F.60, A.63 Ligands: CVM.27 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:A.63 CVM.27: 4 residues within 4Å: Chain D: I.66 Ligands: CVM.21, CVM.26, CVM.28 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:I.66 CVM.28: 4 residues within 4Å: Chain D: A.59, E.62, I.66 Ligands: CVM.27 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:E.62, D:I.66 CVM.29: 5 residues within 4Å: Chain D: E.62 Chain E: A.59, F.60, A.63 Ligands: CVM.34 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:A.63 CVM.30: 4 residues within 4Å: Chain D: I.66, V.70, L.73 Ligands: CVM.34 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:I.66, D:V.70, D:L.73 CVM.31: 2 residues within 4Å: Chain D: L.73, V.74 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:L.73, D:V.74 CVM.32: 2 residues within 4Å: Chain D: L.69 Ligands: CVM.34 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:L.69 CVM.33: 8 residues within 4Å: Chain E: N.4, L.5, A.8, A.9, I.12 Chain F: L.5 Ligands: CVM.25, CVM.41 6 PLIP interactions: 2 interactions with chain D, 4 interactions with chain E Hydrogen bonds: D:S.3, D:S.3, E:S.3, E:L.5 Hydrophobic interactions: E:L.5, E:I.12 CVM.34: 6 residues within 4Å: Chain D: I.66 Chain E: Y.67 Ligands: CVM.29, CVM.30, CVM.32, CVM.35 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:I.66 CVM.35: 4 residues within 4Å: Chain E: I.66, Y.67 Ligands: CVM.34, CVM.36 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:I.66, E:Y.67 CVM.36: 4 residues within 4Å: Chain E: A.59, E.62, I.66 Ligands: CVM.35 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:E.62, E:I.66 CVM.37: 4 residues within 4Å: Chain E: I.66 Chain F: Y.67 Ligands: CVM.38, CVM.40 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:I.66 CVM.38: 3 residues within 4Å: Chain E: L.69, L.73 Ligands: CVM.37 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:L.69, E:L.73 CVM.39: 1 residues within 4Å: Chain E: V.74 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:V.74 CVM.40: 3 residues within 4Å: Chain E: L.69 Ligands: CVM.37, CVM.43 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:L.69 CVM.41: 9 residues within 4Å: Chain E: S.3 Chain F: S.3, N.4, L.5, A.8, A.9 Chain G: L.5 Ligands: CVM.33, CVM.49 4 PLIP interactions: 2 interactions with chain F, 2 interactions with chain E Hydrogen bonds: F:L.5, E:S.3 Water bridges: F:S.3, E:S.3 CVM.42: 6 residues within 4Å: Chain E: E.62 Chain F: A.59, F.60, A.63, Y.67 Ligands: CVM.43 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:A.63 CVM.43: 5 residues within 4Å: Chain F: A.63, I.66, Y.67 Ligands: CVM.40, CVM.42 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:A.63, F:I.66, F:Y.67 CVM.44: 3 residues within 4Å: Chain F: A.59, E.62, I.66 2 PLIP interactions: 2 interactions with chain F Hydrophobic interactions: F:E.62, F:I.66 CVM.45: 3 residues within 4Å: Chain G: Y.67 Ligands: CVM.46, CVM.51 No protein-ligand interaction detected (PLIP) CVM.46: 3 residues within 4Å: Chain F: I.66, V.70 Ligands: CVM.45 2 PLIP interactions: 2 interactions with chain F Hydrophobic interactions: F:I.66, F:V.70 CVM.47: 3 residues within 4Å: Chain F: L.73, V.74, A.78 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:L.73, F:V.74, F:A.78 CVM.48: 1 residues within 4Å: Chain F: L.69 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:L.69 CVM.49: 5 residues within 4Å: Chain G: L.5, A.9 Chain H: L.5 Ligands: CVM.41, CVM.57 1 PLIP interactions: 1 interactions with chain G Hydrophobic interactions: G:A.9 CVM.50: 4 residues within 4Å: Chain F: E.62 Chain G: A.59, F.60, A.63 1 PLIP interactions: 1 interactions with chain G Hydrophobic interactions: G:A.63 CVM.51: 4 residues within 4Å: Chain G: I.66, Y.67 Ligands: CVM.45, CVM.54 2 PLIP interactions: 2 interactions with chain G Hydrophobic interactions: G:I.66, G:Y.67 CVM.52: 3 residues within 4Å: Chain G: L.73, V.74 Ligands: CVM.55 2 PLIP interactions: 2 interactions with chain G Hydrophobic interactions: G:L.73, G:V.74 CVM.53: 4 residues within 4Å: Chain G: I.66 Chain H: Y.67 Ligands: CVM.55, CVM.56 2 PLIP interactions: 1 interactions with chain G, 1 interactions with chain H Hydrophobic interactions: G:I.66, H:Y.67 CVM.54: 4 residues within 4Å: Chain G: A.59, E.62, I.66 Ligands: CVM.51 4 PLIP interactions: 4 interactions with chain G Hydrophobic interactions: G:A.59, G:E.62, G:E.62, G:I.66 CVM.55: 7 residues within 4Å: Chain G: I.66, L.69, V.70, L.73 Ligands: CVM.52, CVM.53, CVM.59 4 PLIP interactions: 4 interactions with chain G Hydrophobic interactions: G:I.66, G:L.69, G:V.70, G:L.73 CVM.56: 4 residues within 4Å: Chain H: I.66, Y.67 Ligands: CVM.53, CVM.59 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:I.66, H:Y.67 CVM.57: 9 residues within 4Å: Chain G: S.3 Chain H: N.4, L.5, A.8, A.9, I.12 Chain I: L.5 Ligands: CVM.49, CVM.65 3 PLIP interactions: 2 interactions with chain H, 1 interactions with chain G Hydrophobic interactions: H:I.12 Hydrogen bonds: H:L.5, G:S.3 CVM.58: 3 residues within 4Å: Chain G: E.62 Chain H: A.63, Y.67 1 PLIP interactions: 1 interactions with chain H Hydrophobic interactions: H:A.63 CVM.59: 2 residues within 4Å: Ligands: CVM.55, CVM.56 No protein-ligand interaction detected (PLIP) CVM.60: 3 residues within 4Å: Chain H: A.59, E.62, I.66 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:E.62, H:I.66 CVM.61: 3 residues within 4Å: Chain H: I.66 Ligands: CVM.62, CVM.67 1 PLIP interactions: 1 interactions with chain H Hydrophobic interactions: H:I.66 CVM.62: 4 residues within 4Å: Chain H: I.66, L.69, L.73 Ligands: CVM.61 3 PLIP interactions: 3 interactions with chain H Hydrophobic interactions: H:I.66, H:L.69, H:L.73 CVM.63: 2 residues within 4Å: Chain H: L.73, A.78 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:L.73, H:A.78 CVM.64: 1 residues within 4Å: Chain H: L.69 1 PLIP interactions: 1 interactions with chain H Hydrophobic interactions: H:L.69 CVM.65: 8 residues within 4Å: Chain I: N.4, L.5, A.8, A.9, I.12 Chain J: L.5 Ligands: CVM.57, CVM.73 4 PLIP interactions: 2 interactions with chain I, 2 interactions with chain H Hydrophobic interactions: I:I.12 Hydrogen bonds: I:L.5 Water bridges: H:S.3, H:S.3 CVM.66: 5 residues within 4Å: Chain H: E.62 Chain I: A.59, F.60, A.63 Ligands: CVM.67 1 PLIP interactions: 1 interactions with chain I Hydrophobic interactions: I:A.63 CVM.67: 4 residues within 4Å: Chain I: I.66 Ligands: CVM.61, CVM.66, CVM.68 1 PLIP interactions: 1 interactions with chain I Hydrophobic interactions: I:I.66 CVM.68: 4 residues within 4Å: Chain I: A.59, E.62, I.66 Ligands: CVM.67 2 PLIP interactions: 2 interactions with chain I Hydrophobic interactions: I:E.62, I:I.66 CVM.69: 5 residues within 4Å: Chain I: E.62 Chain J: A.59, F.60, A.63 Ligands: CVM.74 1 PLIP interactions: 1 interactions with chain J Hydrophobic interactions: J:A.63 CVM.70: 4 residues within 4Å: Chain I: I.66, V.70, L.73 Ligands: CVM.74 3 PLIP interactions: 3 interactions with chain I Hydrophobic interactions: I:I.66, I:V.70, I:L.73 CVM.71: 2 residues within 4Å: Chain I: L.73, V.74 2 PLIP interactions: 2 interactions with chain I Hydrophobic interactions: I:L.73, I:V.74 CVM.72: 2 residues within 4Å: Chain I: L.69 Ligands: CVM.74 1 PLIP interactions: 1 interactions with chain I Hydrophobic interactions: I:L.69 CVM.73: 8 residues within 4Å: Chain J: N.4, L.5, A.8, A.9, I.12 Chain K: L.5 Ligands: CVM.65, CVM.81 6 PLIP interactions: 2 interactions with chain I, 4 interactions with chain J Hydrogen bonds: I:S.3, I:S.3, J:S.3, J:L.5 Hydrophobic interactions: J:L.5, J:I.12 CVM.74: 6 residues within 4Å: Chain I: I.66 Chain J: Y.67 Ligands: CVM.69, CVM.70, CVM.72, CVM.75 1 PLIP interactions: 1 interactions with chain I Hydrophobic interactions: I:I.66 CVM.75: 4 residues within 4Å: Chain J: I.66, Y.67 Ligands: CVM.74, CVM.76 2 PLIP interactions: 2 interactions with chain J Hydrophobic interactions: J:I.66, J:Y.67 CVM.76: 4 residues within 4Å: Chain J: A.59, E.62, I.66 Ligands: CVM.75 2 PLIP interactions: 2 interactions with chain J Hydrophobic interactions: J:E.62, J:I.66 CVM.77: 4 residues within 4Å: Chain J: I.66 Chain K: Y.67 Ligands: CVM.78, CVM.80 1 PLIP interactions: 1 interactions with chain J Hydrophobic interactions: J:I.66 CVM.78: 3 residues within 4Å: Chain J: L.69, L.73 Ligands: CVM.77 2 PLIP interactions: 2 interactions with chain J Hydrophobic interactions: J:L.69, J:L.73 CVM.79: 1 residues within 4Å: Chain J: V.74 1 PLIP interactions: 1 interactions with chain J Hydrophobic interactions: J:V.74 CVM.80: 3 residues within 4Å: Chain J: L.69 Ligands: CVM.77, CVM.83 1 PLIP interactions: 1 interactions with chain J Hydrophobic interactions: J:L.69 CVM.81: 9 residues within 4Å: Chain J: S.3 Chain K: S.3, N.4, L.5, A.8, A.9 Chain L: L.5 Ligands: CVM.73, CVM.89 4 PLIP interactions: 2 interactions with chain K, 2 interactions with chain J Hydrogen bonds: K:L.5, J:S.3 Water bridges: K:S.3, J:S.3 CVM.82: 6 residues within 4Å: Chain J: E.62 Chain K: A.59, F.60, A.63, Y.67 Ligands: CVM.83 1 PLIP interactions: 1 interactions with chain K Hydrophobic interactions: K:A.63 CVM.83: 5 residues within 4Å: Chain K: A.63, I.66, Y.67 Ligands: CVM.80, CVM.82 3 PLIP interactions: 3 interactions with chain K Hydrophobic interactions: K:A.63, K:I.66, K:Y.67 CVM.84: 3 residues within 4Å: Chain K: A.59, E.62, I.66 2 PLIP interactions: 2 interactions with chain K Hydrophobic interactions: K:E.62, K:I.66 CVM.85: 3 residues within 4Å: Chain L: Y.67 Ligands: CVM.86, CVM.91 No protein-ligand interaction detected (PLIP) CVM.86: 3 residues within 4Å: Chain K: I.66, V.70 Ligands: CVM.85 2 PLIP interactions: 2 interactions with chain K Hydrophobic interactions: K:I.66, K:V.70 CVM.87: 3 residues within 4Å: Chain K: L.73, V.74, A.78 3 PLIP interactions: 3 interactions with chain K Hydrophobic interactions: K:L.73, K:V.74, K:A.78 CVM.88: 1 residues within 4Å: Chain K: L.69 1 PLIP interactions: 1 interactions with chain K Hydrophobic interactions: K:L.69 CVM.89: 5 residues within 4Å: Chain L: L.5, A.9 Chain M: L.5 Ligands: CVM.81, CVM.97 1 PLIP interactions: 1 interactions with chain L Hydrophobic interactions: L:A.9 CVM.90: 4 residues within 4Å: Chain K: E.62 Chain L: A.59, F.60, A.63 1 PLIP interactions: 1 interactions with chain L Hydrophobic interactions: L:A.63 CVM.91: 4 residues within 4Å: Chain L: I.66, Y.67 Ligands: CVM.85, CVM.94 2 PLIP interactions: 2 interactions with chain L Hydrophobic interactions: L:I.66, L:Y.67 CVM.92: 3 residues within 4Å: Chain L: L.73, V.74 Ligands: CVM.95 2 PLIP interactions: 2 interactions with chain L Hydrophobic interactions: L:L.73, L:V.74 CVM.93: 4 residues within 4Å: Chain L: I.66 Chain M: Y.67 Ligands: CVM.95, CVM.96 2 PLIP interactions: 1 interactions with chain L, 1 interactions with chain M Hydrophobic interactions: L:I.66, M:Y.67 CVM.94: 4 residues within 4Å: Chain L: A.59, E.62, I.66 Ligands: CVM.91 4 PLIP interactions: 4 interactions with chain L Hydrophobic interactions: L:A.59, L:E.62, L:E.62, L:I.66 CVM.95: 7 residues within 4Å: Chain L: I.66, L.69, V.70, L.73 Ligands: CVM.92, CVM.93, CVM.99 4 PLIP interactions: 4 interactions with chain L Hydrophobic interactions: L:I.66, L:L.69, L:V.70, L:L.73 CVM.96: 4 residues within 4Å: Chain M: I.66, Y.67 Ligands: CVM.93, CVM.99 2 PLIP interactions: 2 interactions with chain M Hydrophobic interactions: M:I.66, M:Y.67 CVM.97: 9 residues within 4Å: Chain L: S.3 Chain M: N.4, L.5, A.8, A.9, I.12 Chain N: L.5 Ligands: CVM.89, CVM.105 3 PLIP interactions: 1 interactions with chain L, 2 interactions with chain M Hydrogen bonds: L:S.3, M:L.5 Hydrophobic interactions: M:I.12 CVM.98: 3 residues within 4Å: Chain L: E.62 Chain M: A.63, Y.67 1 PLIP interactions: 1 interactions with chain M Hydrophobic interactions: M:A.63 CVM.99: 2 residues within 4Å: Ligands: CVM.95, CVM.96 No protein-ligand interaction detected (PLIP) CVM.100: 3 residues within 4Å: Chain M: A.59, E.62, I.66 2 PLIP interactions: 2 interactions with chain M Hydrophobic interactions: M:E.62, M:I.66 CVM.101: 3 residues within 4Å: Chain M: I.66 Ligands: CVM.102, CVM.107 1 PLIP interactions: 1 interactions with chain M Hydrophobic interactions: M:I.66 CVM.102: 4 residues within 4Å: Chain M: I.66, L.69, L.73 Ligands: CVM.101 3 PLIP interactions: 3 interactions with chain M Hydrophobic interactions: M:I.66, M:L.69, M:L.73 CVM.103: 2 residues within 4Å: Chain M: L.73, A.78 2 PLIP interactions: 2 interactions with chain M Hydrophobic interactions: M:L.73, M:A.78 CVM.104: 1 residues within 4Å: Chain M: L.69 1 PLIP interactions: 1 interactions with chain M Hydrophobic interactions: M:L.69 CVM.105: 8 residues within 4Å: Chain N: N.4, L.5, A.8, A.9, I.12 Chain O: L.5 Ligands: CVM.97, CVM.113 4 PLIP interactions: 2 interactions with chain M, 2 interactions with chain N Water bridges: M:S.3, M:S.3 Hydrophobic interactions: N:I.12 Hydrogen bonds: N:L.5 CVM.106: 5 residues within 4Å: Chain M: E.62 Chain N: A.59, F.60, A.63 Ligands: CVM.107 1 PLIP interactions: 1 interactions with chain N Hydrophobic interactions: N:A.63 CVM.107: 4 residues within 4Å: Chain N: I.66 Ligands: CVM.101, CVM.106, CVM.108 1 PLIP interactions: 1 interactions with chain N Hydrophobic interactions: N:I.66 CVM.108: 4 residues within 4Å: Chain N: A.59, E.62, I.66 Ligands: CVM.107 2 PLIP interactions: 2 interactions with chain N Hydrophobic interactions: N:E.62, N:I.66 CVM.109: 5 residues within 4Å: Chain N: E.62 Chain O: A.59, F.60, A.63 Ligands: CVM.114 1 PLIP interactions: 1 interactions with chain O Hydrophobic interactions: O:A.63 CVM.110: 4 residues within 4Å: Chain N: I.66, V.70, L.73 Ligands: CVM.114 3 PLIP interactions: 3 interactions with chain N Hydrophobic interactions: N:I.66, N:V.70, N:L.73 CVM.111: 2 residues within 4Å: Chain N: L.73, V.74 2 PLIP interactions: 2 interactions with chain N Hydrophobic interactions: N:L.73, N:V.74 CVM.112: 2 residues within 4Å: Chain N: L.69 Ligands: CVM.114 1 PLIP interactions: 1 interactions with chain N Hydrophobic interactions: N:L.69 CVM.113: 8 residues within 4Å: Chain A: L.5 Chain O: N.4, L.5, A.8, A.9, I.12 Ligands: CVM.1, CVM.105 6 PLIP interactions: 2 interactions with chain N, 4 interactions with chain O Hydrogen bonds: N:S.3, N:S.3, O:S.3, O:L.5 Hydrophobic interactions: O:L.5, O:I.12 CVM.114: 6 residues within 4Å: Chain N: I.66 Chain O: Y.67 Ligands: CVM.109, CVM.110, CVM.112, CVM.115 1 PLIP interactions: 1 interactions with chain N Hydrophobic interactions: N:I.66 CVM.115: 4 residues within 4Å: Chain O: I.66, Y.67 Ligands: CVM.114, CVM.116 2 PLIP interactions: 2 interactions with chain O Hydrophobic interactions: O:I.66, O:Y.67 CVM.116: 4 residues within 4Å: Chain O: A.59, E.62, I.66 Ligands: CVM.115 2 PLIP interactions: 2 interactions with chain O Hydrophobic interactions: O:E.62, O:I.66 CVM.117: 4 residues within 4Å: Chain A: Y.67 Chain O: I.66 Ligands: CVM.118, CVM.120 1 PLIP interactions: 1 interactions with chain O Hydrophobic interactions: O:I.66 CVM.118: 3 residues within 4Å: Chain O: L.69, L.73 Ligands: CVM.117 2 PLIP interactions: 2 interactions with chain O Hydrophobic interactions: O:L.69, O:L.73 CVM.119: 1 residues within 4Å: Chain O: V.74 1 PLIP interactions: 1 interactions with chain O Hydrophobic interactions: O:V.74 CVM.120: 3 residues within 4Å: Chain O: L.69 Ligands: CVM.3, CVM.117 1 PLIP interactions: 1 interactions with chain O Hydrophobic interactions: O:L.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pogoryelov, D. et al., High-Resolution Structure of the Rotor Ring of a Proton-Dependent ATP Synthase. Nat.Struct.Mol.Biol. (2009)

Release Date

2009-09-29

Peptides

ATP SYNTHASE C CHAIN: ABCDEFGHIJKLMNO

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
A

G
B

H
C

I
D

J
E

K
A

L
B

M
C

N
D

O
E

Membrane

We predict this structure to be a membrane protein.
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ATP SYNTHASE C CHAIN

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