SMTL ID : 2wj9.1

ArdB

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

homo-dimer

Ligands

5 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 4 residues within 4Å: Chain A: C.173, S.174, M.177 Chain B: L.43 No protein-ligand interaction detected (PLIP) BME.3: 5 residues within 4Å: Chain A: P.68, T.151, E.152, C.153 Ligands: BME.4 No protein-ligand interaction detected (PLIP) BME.4: 6 residues within 4Å: Chain A: C.153, Y.154, A.155 Chain B: A.155 Ligands: BME.3, BME.10 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.155 Water bridges: B:Y.154 BME.7: 5 residues within 4Å: Chain A: L.43 Chain B: L.168, C.173, S.174, M.177 No protein-ligand interaction detected (PLIP) BME.10: 5 residues within 4Å: Chain B: L.66, P.68, C.153 Ligands: BME.4, MPD.8 No protein-ligand interaction detected (PLIP)

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 2 residues within 4Å: Chain A: R.127, R.178 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.178 MPD.8: 6 residues within 4Å: Chain B: G.65, L.66, I.67, P.68, W.70 Ligands: BME.10 No protein-ligand interaction detected (PLIP) MPD.9: 8 residues within 4Å: Chain A: R.164, L.168 Chain B: G.42, L.43, Q.44, D.165, L.168, Q.169 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.168, A:L.168 Hydrogen bonds: B:Q.44, B:Q.169

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.6: 4 residues within 4Å: Chain B: R.76, W.80, R.83, H.146 8 PLIP interactions: 8 interactions with chain B Water bridges: B:R.83, B:R.83, B:H.146, B:H.146, B:H.146 Salt bridges: B:R.76, B:R.83, B:H.146

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.11: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oke, M. et al., The Scottish Structural Proteomics Facility: Targets, Methods and Outputs. J.Struct.Funct.Genomics (2010)

Release Date

2010-08-18

Peptides

INTERGENIC-REGION PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

INTERGENIC-REGION PROTEIN