SMTL ID : 2wl1.1

Pyrin PrySpry domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

2 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.1: 2 residues within 4Å: Chain A: G.165, P.166 No protein-ligand interaction detected (PLIP) SCN.2: 3 residues within 4Å: Chain A: P.121, T.122, R.123 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.123

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: A.10, A.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.10 EDO.4: 8 residues within 4Å: Chain A: A.79, W.80, I.81, I.107, M.108, M.109, G.174, T.175 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.108, A:T.175 EDO.5: 1 residues within 4Å: Chain A: E.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.4 Water bridges: A:E.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weinert, C. et al., The Crystal Structure of Human Pyrin B30.2 Domain: Implications for Mutations Associated with Familial Mediterranean Fever. J.Mol.Biol. (2009)

Release Date

2009-10-20

Peptides

PYRIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PYRIN