- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 8 x K: POTASSIUM ION(Non-covalent)
K.2: 4 residues within 4Å:- Chain A: T.26, I.27, D.93, V.180
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:T.26, A:I.27, A:D.93, A:V.180, H2O.2
K.3: 3 residues within 4Å:- Chain A: K.457, G.460
- Chain B: L.246
5 PLIP interactions:1 interactions with chain B, 2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: B:L.246, A:K.457, A:G.460, H2O.13, H2O.21
K.8: 4 residues within 4Å:- Chain B: T.26, I.27, D.93, V.180
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:T.26, B:I.27, B:D.93, B:V.180, H2O.16
K.9: 3 residues within 4Å:- Chain A: L.246
- Chain B: K.457, G.460
5 PLIP interactions:1 interactions with chain A, 2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: A:L.246, B:K.457, B:G.460, H2O.8, H2O.8
K.13: 4 residues within 4Å:- Chain C: T.26, I.27, D.93, V.180
5 PLIP interactions:5 interactions with chain C- Metal complexes: C:T.26, C:I.27, C:D.93, C:D.93, C:V.180
K.14: 3 residues within 4Å:- Chain C: K.457, G.460
- Chain D: L.246
5 PLIP interactions:1 interactions with chain D, 2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: D:L.246, C:K.457, C:G.460, H2O.48, H2O.48
K.20: 4 residues within 4Å:- Chain D: T.26, I.27, D.93, V.180
5 PLIP interactions:4 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:T.26, D:I.27, D:D.93, D:V.180, H2O.44
K.21: 3 residues within 4Å:- Chain C: L.246
- Chain D: K.457, G.460
5 PLIP interactions:2 interactions with chain D, 1 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: D:K.457, D:G.460, C:L.246, H2O.35, H2O.35
- 7 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 4 residues within 4Å:- Chain A: Y.154, Q.157, V.285, T.287
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.157
- Water bridges: A:Q.157
GOL.5: 2 residues within 4Å:- Chain A: A.304, L.307
1 PLIP interactions:1 interactions with chain A- Water bridges: A:A.304
GOL.10: 4 residues within 4Å:- Chain B: Y.154, Q.157, W.161, V.285
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Q.157
- Water bridges: B:N.153, B:Q.157, B:S.447
GOL.15: 5 residues within 4Å:- Chain C: W.161, E.252, T.287, I.438
- Ligands: GOL.16
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.252, C:E.252
GOL.16: 5 residues within 4Å:- Chain C: Y.154, Q.157, W.161, V.285
- Ligands: GOL.15
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:Q.157
- Water bridges: C:N.153, C:C.286, C:T.287, C:T.287
GOL.17: 3 residues within 4Å:- Chain C: F.4, Q.7, K.187
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.7, C:K.187
GOL.18: 4 residues within 4Å:- Chain D: Q.157, W.161, V.285, T.287
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:Q.157, D:T.287
- Water bridges: D:G.445
- 2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gonzalez-Segura, L. et al., The Crystal Structure of a Ternary Complex of Betaine Aldehyde Dehydrogenase from Pseudomonas Aeruginosa Provides New Insight Into the Reaction Mechanism and Shows a Novel Binding Mode of the 2'- Phosphate of Nadp(+) and a Novel Cation Binding Site. J.Mol.Biol. (2009)
- Release Date
- 2009-08-04
- Peptides
- BETAINE ALDEHYDE DEHYDROGENASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 8 x K: POTASSIUM ION(Non-covalent)
- 7 x GOL: GLYCEROL(Non-functional Binders)
- 2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gonzalez-Segura, L. et al., The Crystal Structure of a Ternary Complex of Betaine Aldehyde Dehydrogenase from Pseudomonas Aeruginosa Provides New Insight Into the Reaction Mechanism and Shows a Novel Binding Mode of the 2'- Phosphate of Nadp(+) and a Novel Cation Binding Site. J.Mol.Biol. (2009)
- Release Date
- 2009-08-04
- Peptides
- BETAINE ALDEHYDE DEHYDROGENASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EB
FC
GD
H