SMTL ID : 2wnu.1 (1 other biounit)

Complex between c1q globular heads and heparan sulfate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x SGN- IDU: 2-O-sulfo-beta-L-altropyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose(Non-covalent)

SGN-IDU.1: 8 residues within 4Å: Chain C: N.21, S.22, L.23, K.43, Y.69, G.72, W.104, A.106 3 PLIP interactions: 3 interactions with chain C Salt bridges: C:K.43 Hydrogen bonds: C:N.21, C:L.23, C:Y.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garlatti, V. et al., Cutting Edge: C1Q Binds Deoxyribose and Heparan Sulfate Through Neighboring Sites of its Recognition Domain. J.Immunol. (2010)

Release Date

2010-05-26

Peptides

COMPLEMENT C1Q SUBCOMPONENT SUBUNIT A: A
COMPLEMENT C1Q SUBCOMPONENT SUBUNIT B: B
COMPLEMENT C1Q SUBCOMPONENT SUBUNIT C: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

COMPLEMENT C1Q SUBCOMPONENT SUBUNIT A

COMPLEMENT C1Q SUBCOMPONENT SUBUNIT B

COMPLEMENT C1Q SUBCOMPONENT SUBUNIT C

Related Entries With Identical Sequence